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Biodiversity Data Journal 2: e1079
https://doi.org/10.3897/BDJ.2.e1079 (29 Apr 2014)
https://doi.org/10.3897/BDJ.2.e1079 (29 Apr 2014)
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The macroevolutionary dynamics of mammalian sexual size dimorphism. Proceedings of the Royal Society B: Biological Sciences 290: .
An Information-theoretic approach to dimensionality reduction in data science. International Journal of Data Science and Analytics 12: 185.
Dynamic visualisation of million‐tip trees: The OneZoom project. Methods in Ecology and Evolution 13: 303.
Plant naturalizations are constrained by temperature but released by precipitation. Global Ecology and Biogeography 31: 501.
Citizen Science: New Research Challenges for Human–Computer Interaction. International Journal of Human-Computer Interaction 32: 585.
Use of native aquatic macrophytes in the reduction of organic matter from dairy effluents. International Journal of Phytoremediation 19: 781.
Aggregation of Italian Lichen Data in ITALIC 7.0. Journal of Fungi 9: 556.
TuLeD (Tupían lexical database): introducing a database of a South American language family. Language Resources and Evaluation 55: 997.
Functional diversity and metabolic response in benthic communities along an ocean acidification gradient. Marine Environmental Research : 106520.
SILVA, RDP, Greengenes, NCBI and OTT — how do these taxonomies compare?. BMC Genomics 18: .
Computer-Based Activity to Engage Students in Exploring Biodiversity Decline & Extinction. The American Biology Teacher 84: 82.
Ontology enhancement using crowdsourcing: a conceptual architecture. International Journal of Crowd Science 4: 231.
Diet, prey selection, and activity of Asian golden cats and leopard cats in northern Laos. Journal of Mammalogy 101: 1267.
Last glaciation to the present: Paleohydrographic reconstruction based on the paleobiofacies distribution in the sediment in the Sea of Marmara. Marine Geology 453: 106923.
Microplastics accumulate fungal pathogens in terrestrial ecosystems. Scientific Reports 11: .
Using faecal metabarcoding to examine consumption of crop pests and beneficial arthropods in communities of generalist avian insectivores. Ibis 164: 27.
A decade of the World Register of Marine Species – General insights and experiences from the Data Management Team: Where are we, what have we learned and how can we continue?. PLOS ONE 13: e0194599.
The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation. Journal of Biomedical Semantics 7: .
PubChem 2025 update. Nucleic Acids Research 53: D1516.
Large language models help facilitate the automated synthesis of information on potential pest controllers. Methods in Ecology and Evolution 15: 1261.
Functional changes in benthic macrofaunal communities along a natural gradient of hypoxia in an upwelling system. Marine Pollution Bulletin 164: 112056.
GTDrift: a resource for exploring the interplay between genetic drift, genomic and transcriptomic characteristics in eukaryotes. NAR Genomics and Bioinformatics 6: .
Usage patterns of blue flower color representation by Encyclopedia of Life content providers . Biodiversity Data Journal 2: .
Impact of changes of horse movement regulations on the risks of equine infectious anemia: A risk assessment approach. Preventive Veterinary Medicine 190: 105319.
TraitBank: Practical semantics for organism attribute data. Semantic Web 7: 577.
PoachNet: Predicting Poaching Using an Ontology-Based Knowledge Graph. Sensors 24: 8142.
Identifying gaps in the photographic record of the vascular plant flora of the Americas. Nature Plants 7: 1010.
Hygromechanical properties of grenadilla wood (Dalbergia melanoxylon). Wood Science and Technology 54: 1269.
EXTRACT: interactive extraction of environment metadata and term suggestion for metagenomic sample annotation. Database 2016: baw005.
ENVIRONMENTS and EOL: identification of Environment Ontology terms in text and the annotation of the Encyclopedia of Life. Bioinformatics 31: 1872.
Phytoplankton thermal responses adapt in the absence of hard thermodynamic constraints. Evolution 74: 775.
Building a community-based taxonomic resource for digitization of parasites and their hosts. Insect Systematics and Diversity 7: .
Notes on types of Australian Chartocerus Motschulsky (Hymenoptera: Signiphoridae). Journal of Natural History 54: 681.
Introducing African Plants—A Photo Guide—An Interactive Photo Data‐Base and Rapid Identification Tool for Continental Africa. TAXON 63: 1159.
Miniscule Mollicutes: Current hurdles to bacteriophage identification. Sustainable Microbiology 1: .
Global Cicada Sound Collection I: Recordings from South Africa and Malawi by B. W. Price & M. H. Villet and harvesting of BioAcoustica data by GBIF. Biodiversity Data Journal 3: .
Spatial distribution of environmental DNA in a nearshore marine habitat. PeerJ 5: e3044.
Comparative analysis of the genomes of Stylophora pistillata and Acropora digitifera provides evidence for extensive differences between species of corals. Scientific Reports 7: .
Mobilization and integration of bacterial phenotypic data—Enabling next generation biodiversity analysis through the BacDive metadatabase. Journal of Biotechnology 261: 187.
Evidence for Alternate Stable States in an Ecuadorian Andean Cloud Forest. Forests 13: 875.
Frugivoria: A trait database for birds and mammals exhibiting frugivory across contiguous Neotropical moist forests. Global Ecology and Biogeography 32: 1466.
How Aphia—The Platform behind Several Online and Taxonomically Oriented Databases—Can Serve Both the Taxonomic Community and the Field of Biodiversity Informatics. Journal of Marine Science and Engineering 3: 1448.
Jump around: Selecting Markov Chain Monte Carlo parameters and diagnostics for improved food web model quality and ecosystem representation. Ecological Informatics 84: 102865.
A comprehensive view of the web-resources related to sericulture. Database 2016: baw086.
Adaptive division of growth and development between hosts in helminths with two‐host life cycles. Evolution 76: 1971.
Global biotic interactions: An open infrastructure to share and analyze species-interaction datasets. Ecological Informatics 24: 148.
The bushmeat trade in northern Ghana: market dynamics, drivers of trade and implications for conservation. Oryx 57: 216.
First reported case of Phoma multirostrata from central India. Microbiologia Medica 39: .
PhyloSophos: a high-throughput scientific name mapping algorithm augmented with explicit consideration of taxonomic science, and its application on natural product (NP) occurrence database processing. BMC Bioinformatics 24: .
Connecting Species-Specific Extents of Genome Reduction in Mitochondria and Plastids. Molecular Biology and Evolution 41: .
Access to Marine Genetic Resources (MGR): Raising Awareness of Best-Practice Through a New Agreement for Biodiversity Beyond National Jurisdiction (BBNJ). Frontiers in Marine Science 6: .
Identifying uncertainties in scenarios and models of socio-ecological systems in support of decision-making. One Earth 4: 967.
No evidence for a signal in mammalian basal metabolic rate associated with a fossorial lifestyle. Scientific Reports 14: .
20 GB in 10 minutes: a case for linking major biodiversity databases using an open socio-technical infrastructure and a pragmatic, cross-institutional collaboration. PeerJ Computer Science 4: e164.
Leaf Dry Matter Content Is Phylogenetically Conserved and Related to Environmental Conditions, Especially Wildfire Activity. Ecology Letters 28: .
Biomolecule and Bioentity Interaction Databases in Systems Biology: A Comprehensive Review. Biomolecules 11: 1245.
Different orthology inference algorithms generate similar predicted orthogroups among Brassicaceae species. Applications in Plant Sciences 13: .
Variation in resting strategies across trophic levels and habitats in mammals. Ecology and Evolution 11: 14405.
Achieving pan-microbiome biological insights via the dbBact knowledge base. Nucleic Acids Research 51: 6593.
Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR. F1000Research 10: 1238.
Invading plants remain undetected in a lag phase while they explore suitable climates. Nature Ecology & Evolution 8: 477.
Diatoms.org: supporting taxonomists, connecting communities. Diatom Research 36: 291.
Construction of TUATinsecta database that integrated plant and insect database for screening phytophagous insect metabolic products with medicinal potential. Scientific Reports 10: .
Challenges facing systematic biology. TAXON 69: 655.
Host phylogenetic distance drives trends in virus virulence and transmissibility across the animal–human interface. Philosophical Transactions of the Royal Society B: Biological Sciences 374: 20190296.
Traits Shared by Marine Megafauna and Their Relationships With Ecosystem Functions and Services. Frontiers in Marine Science 6: .
Synopsis of fruit-piercing moths of the genus Eudocima (Lepidoptera, Erebidae) from Colombia. ZooKeys 953: 85.
Automating the Curation Process of Historical Literature on Marine Biodiversity Using Text Mining: The DECO Workflow. Frontiers in Marine Science 9: .
Phylogeography of Equine Infectious Anemia Virus. Frontiers in Ecology and Evolution 8: .
Assembling an illustrated family‐level tree of life for exploration in mobile devices. Journal of Systematics and Evolution 62: 993.
Remedies of animal origin and their indications in Nikolaos Myrepsos׳ Dynameron. Journal of Ethnopharmacology 276: 114191.
The influence of human activity on predator–prey spatiotemporal overlap. Journal of Animal Ecology 92: 1124.
Projected Scenarios for Coastal First Nations’ Fisheries Catch Potential under Climate Change: Management Challenges and Opportunities. PLOS ONE 11: e0145285.
Detecting Bias in Large-Scale Comparative Analyses: Methods for Expanding the Scope of Hypothesis-Testing with HormoneBase. Integrative and Comparative Biology 58: 720.
Phoma Infections: Classification, Potential Food Sources, and Their Clinical Impact. Microorganisms 6: 58.
Integrating and Utilizing Citizen Biodiversity Data on the Web for Science: An Example of a Rare Triggerfish Hybrid Image Provided by a Sport Fisherman. Journal of Coastal Research 314: 1035.
The relational modeling of hierarchical data in biodiversity databases. Database 2024: .
Partial purification and characterization of a thermophilic and alkali-stable laccase of Phoma herbarum isolate KU4 with dye-decolorization efficiency. Preparative Biochemistry & Biotechnology 51: 901.
The genome of the giant Nomura’s jellyfish sheds light on the early evolution of active predation. BMC Biology 17: .
Metabarcoding Used for the First Time to Identify Prey of Wild Totoaba macdonaldi . Integrative And Comparative Biology 63: 276.
Ecological Predictors of Organelle Genome Evolution: Phylogenetic Correlations with Taxonomically Broad, Sparse, Unsystematized Data. Systematic Biology 73: 419.
Functional trait‐based approaches as a common framework for aquatic ecologists. Limnology and Oceanography 66: 965.
BioAcoustica: a free and open repository and analysis platform for bioacoustics. Database 2015: .
Acetobacteraceae as exopolysaccharide producers: Current state of knowledge and further perspectives. Frontiers in Bioengineering and Biotechnology 11: .
Constructing a biodiversity terminological inventory. PLOS ONE 12: e0175277.
A meta‐analysis of recreation effects on vertebrate species richness and abundance. Conservation Science and Practice 1: .
A simple approach for maximizing the overlap of phylogenetic and comparative data. Methods in Ecology and Evolution 7: 751.
A statistical assessment of population trends for data deficient Mexican amphibians. PeerJ 2: e703.
Radiating pain: venom has contributed to the diversification of the largest radiations of vertebrate and invertebrate animals. BMC Ecology and Evolution 21: .
Co-evolution based machine-learning for predicting functional interactions between human genes. Nature Communications 12: .
Phylotastic: Improving Access to Tree-of-Life Knowledge With Flexible, on-the-Fly Delivery of Trees. Evolutionary Bioinformatics 16: .
Global ecosystem-scale plant hydraulic traits retrieved using model–data fusion. Hydrology and Earth System Sciences 25: 2399.
Olfactory receptor repertoire size in dinosaurs. Proceedings of the Royal Society B: Biological Sciences 286: 20190909.
Extinction filters mediate the global effects of habitat fragmentation on animals. Science 366: 1236.
Integrating natural history collections and comparative genomics to study the genetic architecture of convergent evolution. Philosophical Transactions of the Royal Society B: Biological Sciences 374: 20180248.
Taxallnomy: an extension of NCBI Taxonomy that produces a hierarchically complete taxonomic tree. BMC Bioinformatics 22: .
Identification of fungal metabolites from inside Gallus gallus domesticus eggshells by non-invasively detecting volatile organic compounds (VOCs). Analytical and Bioanalytical Chemistry 408: 6649.
Crowdsourced geometric morphometrics enable rapid large‐scale collection and analysis of phenotypic data. Methods in Ecology and Evolution 7: 472.
Comparative metagenomics analysis reveals how the diet shapes the gut microbiota in several small mammals. Ecology and Evolution 12: .
Biodiversity of vertebrates in Argentina: patterns of richness, endemism and conservation status. ZooKeys 1085: 101.
Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR. F1000Research 10: 1238.
Body size affects immune cell proportions in birds and non-volant mammals, but not bats. Journal of Experimental Biology 224: .
A review of the heterogeneous landscape of biodiversity databases: Opportunities and challenges for a synthesized biodiversity knowledge base. Global Ecology and Biogeography 31: 1242.
The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants. Journal of Biomedical Semantics 7: .
Concordant and opposing effects of climate and land-use change on avian assemblages in California’s most transformed landscapes. Science Advances 9: .
Recovery of amphibian, reptile, bird and mammal diversity during secondary forest succession in the tropics. Oikos 128: 1065.
A century of climate and land‐use change cause species turnover without loss of beta diversity in California’s Central Valley. Global Change Biology 24: 5882.
Invertebrate Grazing on Live Turtlegrass (Thalassia testudinum): A Common Interaction That May Facilitate Fungal Growth. Frontiers in Marine Science 8: .
Photosynthesis measurements on the upper and lower side of the thallus of the foliose lichen Nephroma arcticum (L.) Torss. Photosynthesis Research 149: 289.
Is my fishing gear impacting the habitat? An impact assessment in four fisheries in the Northwest Mexican Pacific. Ocean & Coastal Management 258: 107358.
Evolutionary integration of forelimb and hindlimb proportions within the bat wing membrane inhibits ecological adaptation. Nature Ecology & Evolution 9: 111.
Applying evolutionary genetics to developmental toxicology and risk assessment. Reproductive Toxicology 69: 174.
A global analysis of traits predicting species sensitivity to habitat fragmentation. Global Ecology and Biogeography 26: 115.
A Codon Model for Associating Phenotypic Traits with Altered Selective Patterns of Sequence Evolution. Systematic Biology 70: 608.
Leukocyte allometries in birds are not affected by captivity. Journal of Experimental Zoology Part A: Ecological and Integrative Physiology 337: 576.
Evolutionary Inference across Eukaryotes Identifies Specific Pressures Favoring Mitochondrial Gene Retention. Cell Systems 2: 101.
Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle. Scientific Reports 6: .
The Evolution of Rodent Tail Morphology. The American Naturalist 203: 629.
Birds suppress pests in corn but release them in soybean crops within a mixed prairie/agriculture system. The Condor 122: .
Revising the global biogeography of annual and perennial plants. Nature 624: 109.
Mangrove-mudflat connectivity shapes benthic communities in a tropical intertidal system. Ecological Indicators 130: 108030.
Prediction of adverse biological effects of chemicals using knowledge graph embeddings. Semantic Web 13: 299.
Bats: Body mass index, forearm mass index, blood glucose levels and SLC2A2 genes for diabetes. Scientific Reports 6: .
Integrating Biodiversity Data into Botanic Collections. Biodiversity Data Journal 4: .
Traits-based approaches support the conservation relevance of landscape genetics. Conservation Genetics 19: 17.
Using the EDIT Platform for Cybertaxonomy to prepare and publish a treatment for the Caryophyllales Network: an online synthesis of the Nepenthaceae. Willdenowia 48: 335.
Unraveling the functional diversity of macrobenthic community from Prydz Bay, Indian sector of the Southern Ocean. Continental Shelf Research 263: 105043.
Oxygen Limitation at the Larval Stage and the Evolution of Maternal Investment per Offspring in Aquatic Environments. The American Naturalist 191: 604.
Functional exploration of natural networks and ecological communities. Methods in Ecology and Evolution 9: 2028.
Plastiphily is linked to generic virulence traits of important human pathogenic fungi. Communications Earth & Environment 5: .
Using lexicography to characterise relations between species mentions in the biodiversity literature. Proceedings of the 3rd International Conference on Digital Access to Textual Cultural Heritage : 143.
Food Science and the Culinary Arts. : 225.
Artificial Intelligence in Education. Chapter 4: 20.
Intelligent Tutoring Systems. Chapter 21: 189.
Artificial Intelligence in Education. Chapter 6: 31.
Phoma: Diversity, Taxonomy, Bioactivities, and Nanotechnology. Chapter 9: 161.
Agriculture in Africa: Telling Myths from Facts. : 115.
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