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Biodiversity Data Journal 5: e12581
https://doi.org/10.3897/BDJ.5.e12581 (22 May 2017)
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  • ContentsContents
  • Article InfoArticle Info
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  • Introduction
    • The Open Tree of Life project
    • Reference taxonomy requirements
    • Related work
  • Method
    • Terminology
    • Method overview
    • Taxonomic sources
    • Import and Normalization
    • Aligning nodes across taxonomies
      • Ad hoc adjustments
      • Candidate identification
      • Candidate selection
      • Alignment heuristics
      • Control flow for applying heuristics
      • Failure to choose
      • Redescriptions
    • Merging unaligned source nodes
      • Merging node data
    • Final patches
    • Assigning identifiers
  • Results
    • Summary of Open Tree Taxonomy
    • Results of assembly procedure
    • Evaluating the taxonomy relative to requirements
      • OTU coverage
      • Phylogenetically informed classification
      • Taxonomic coverage
      • Ongoing update
      • Open data
  • Discussion
    • Community curation
    • Comparison to other taxonomies
    • Potential improvements and future work
  • Data resources
  • Conclusions
  • Acknowledgements
  • References
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