Biodiversity Data Journal :
Taxonomy & Inventories
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Corresponding author: M. Andrew Johnston (ajohnston@asu.edu)
Academic editor: Hume Douglas
Received: 14 Feb 2023 | Accepted: 15 May 2023 | Published: 28 Jun 2023
© 2023 M. Andrew Johnston, Evan Waite, Ethan Wright, Brian Reily, Gilma De Leon, Angela Esquivel, Jacob Kerwin, Maria Salazar, Emiliano Sarmiento, Tommy Thiatmaja, Sangmi Lee, Kelsey Yule, Nico Franz
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Johnston MA, Waite ES, Wright ER, Reily BH, De Leon GJ, Esquivel AI, Kerwin J, Salazar M, Sarmiento E, Thiatmaja T, Lee S, Yule K, Franz N (2023) Insect collecting bias in Arizona with a preliminary checklist of the beetles from the Sand Tank Mountains. Biodiversity Data Journal 11: e101960. https://doi.org/10.3897/BDJ.11.e101960
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The State of Arizona in the south-western United States supports a high diversity of insects. Digitised occurrence records, especially from preserved specimens in natural history collections, are an important and growing resource to understand biodiversity and biogeography. Underlying bias in how insects are collected and what that means for interpreting patterns of insect diversity is largely untested. To explore the effects of insect collecting bias in Arizona, the State was regionalised into specific areas. First, the entire State was divided into broad biogeographic areas by ecoregion. Second, the 81 tallest mountain ranges were mapped on to the State. The distribution of digitised records across these areas were then examined.
A case study of surveying the beetles (Insecta, Coleoptera) of the Sand Tank Mountains is presented. The Sand Tanks are a low-elevation range in the Lower Colorado River Basin subregion of the Sonoran Desert from which a single beetle record was published before this study.
The number of occurrence records and collecting events are very unevenly distributed throughout Arizona and do not strongly correlate with the geographic size of areas. Species richness is estimated for regions in Arizona using rarefaction and extrapolation. Digitised records from the disproportionately highly collected areas in Arizona represent at best 70% the total insect diversity within them. We report a total of 141 species of Coleoptera from the Sand Tank Mountains, based on 914 digitised voucher specimens. These specimens add important new records for taxa that were previously unavailable in digitised data and highlight important biogeographic ranges.
Possible underlying mechanisms causing bias are discussed and recommendations are made for future targeted collecting of under-sampled regions. Insect species diversity is apparently at best 70% documented for the State of Arizona with many thousands of species not yet recorded. The Chiricahua Mountains are the most densely sampled region of Arizona and likely contain at least 2,000 species not yet vouchered in online data. Preliminary estimates for species richness of Arizona are at least 21,000 and likely much higher. Limitations to analyses are discussed which highlight the strong need for more insect occurrence data.
Madrean Sky Islands, beetles, natural history museums, biogeography, Sonoran Desert
Insects represent over half of all described species (
Biodiversity occurrence records represent an enormously important, invaluable and irreplaceable data source for understanding biodiversity, evolution and ecology (
The goals of this study are twofold. First, we present an analysis of digitised insect occurrence data from the State of Arizona and compare the relative levels of sampling for different mountain ranges and ecoregions. Second, we address one example of an underexplored region and provide the first checklist of beetle species from the Sand Tank Mountains of central Arizona. We hope that these data and analyses can inform and bolster future insect collecting to improve our understanding of Arizona's biodiversity.
Arizona encompasses a wide array of habitat types ranging from extreme deserts to mesic conifer forests. To efficiently classify these regions, different levels of the hierarchical ecoregions defined by
Maps of the State of Arizona showing geographic regions and occurrence records.
Arizona can also be regionalised by its many mountain ranges. The Madrean Sky Islands are a series of discrete mountain ranges that arise from surrounding grasslands and are variously forested at their higher elevations (Fig.
Outlines of the 81 mountain ranges in Arizona with the highest peaks were geographically mapped for use in this study and are shown in Fig.
The Sand Tank Mountains, located in south central Arizona (Fig.
Sand Tank Mountains with views of terrain and habitat.
Very little is known about the fauna of the Sand Tank Mountains and the adjoining Sauceda Mountains to the southwest (Fig.
Prior to the study presented here, a total of 27 occurrence records representing 16 insect taxa were available online (
Occurrence records for insects (Fig.
The occurrence records were imported into qGIS 3.24 (
For entomological field work, differences in occurrence records likely reveal a compilation of biological differences (e.g. increased insect biomass and population densities would increase the number of occurrence records), differences in survey effort (e.g. one area may have been visited by 100 researchers a year and another area by 10 researchers per year) and differences in social practices and research interests (e.g. one person may collect 100 of 200 observed individual insects at a particular event, while another person may collect 5 of 200 observed individual insects at a different event). Insect occurrence records were, therefore, analysed according to three different metrics, namely records, collecting events and species. First, the total number of occurrence records for a given ecoregion or mountain range were tallied as a sum. Second, collecting effort was approximated by pooling records into putative collecting events. All insect records from a particular ecoregion or mountain range that had an identical date (using dwc:day, month and year fields) and collector (dwc:recordedBy field) were considered to belong to a single collecting event. Third, putatively unique insect taxa were totalled for each ecoregion and mountain range by counting unique scientific names (dwc:scientificName field). These names correspond to the taxonomic interpretation according to the GBIF backbone taxonomy. This count may be considered an overestimate because different individuals of the same taxon may have been identified to different ranks (e.g. subspecies, species, genus and family) and be counted multiple times. However, because so many taxa at the species level are not known to the GBIF taxonomy, many differently identified taxa are prone to being 'lumped' into a higher classification level (
Sampling effort to geographic area relationships were explored using linear regressions of both total occurrence records and tabulated collecting events to geographic area of regions (both for ecoregions and mountain ranges). A linear fit with high correlation would indicate that insect collecting was evenly distributed throughout space, while stronger departures from such a relationship would indicate confounding factors affecting the distribution of insect sampling across the State. There is some debate about what the most appropriate models are for species-area relationships and growing evidence suggests that very small, intermediate and very large areas operate under very different scaling parameters (
Possible factors responsible for underlying bias within the occurrence records were assessed using the R package sampbias (
Species richness within areas was estimated using the R package iNEXT (
Three collecting trips were made to the Sand Tank Mountains to survey for beetles. The first was on 29 April 2022 where blacklighting and night searches with headlamps were performed in a rocky basin near a paved wildlife water catchment basin (32.7868, -112.5177). Uncovered pitfall traps were set here and in a wide sandy wash (32.7982, -112.5112, Fig.
The checklist of species was built using the Ecdysis portal checklist tool from all of the digitised specimen records created as part of this project. The curated checklist was then exported for publication and inserted into the ARPHA writing platform for this journal. Families are presented in alphabetical order and all species are presented alphabetically under their family. A total of 140 new species level records were identified, anchored by 914 fully digitised pinned and labelled voucher specimens. When combined with the previously available record, the following checklist enumerates 141 species of Coleoptera from the mountain range.
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This genus is in need of revision and we were unable to identify our specimens beyond genus.
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Identification reference: F.W. Skillman unpublished data.
Identification reference: F.W. Skillman unpublished data.
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This genus needs revision and we were unable to identify our specimens beyond genus.
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This genus needs revision and we were unable to identify our specimens beyond genus.
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Identification reference: B.H. Reily unpublished data.
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Identification of this genus requires examination of male terminalia. Our single putatively female specimen was only identified to the subgenus Scymnus (Pullus), of which there are a number of species known from this region.
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This diverse genus is difficult to identify without genitalic dissections and we were unabe to identify our specimen to species.
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This speciose genus is difficult to identify and we were unable to identify our single specimen beyond genus.
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Identification reference: M.L. Gimmel unpublished data.
Identification reference: M.L. Gimmel unpublished data.
This genus has limited identification resources available. Our two specimens resemble Mordellina testacea (Blatchley, 1910) - a species only reported from the eastern United States.
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A moderate series of this Oxycopis species likely represent an undescribed species which we were unable to associate with any currently known from the western United States.
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This speciose genus is in need of a modern revision. Our single specimen has elytra that lack discernible striae and may be near Tricorynus lentus (Fall, 1905).
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Identification reference: W.B. Warner unpublished data.
Identification reference: W.B. Warner unpublished data.
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Identification reference: W.B. Warner unpublished data.
Identification reference: W.B. Warner unpublished data.
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This genus lacks a comprehensive key to species, but genitalic dissections indicate that our series of specimens likely represent an undescribed species.
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Our specimens somewhat resemble Ahasverus rectus (LeConte, 1854), but differ in several characters from the holotype of that species. We have seen conspecific specimens to ours labelled as "Ahasverus n.sp." in collections and think it is likely that it is, indeed, an undescribed species.
We were unable to identify our single specimen of this species beyond the level of genus in this speciose group.
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The checklist provided herein significantly raises the entomological knowledge of this mountain range. Our collecting efforts unfortunately were comprehensively limited as they did not include sampling during the peak flowering season that typically occurs between late February and April or in the winter which has a distinct insect fauna that often does not overlap with the taxa found during the warmer times of year. We also were unable to access a number of distinct habitats, including the relictual chaparral plant communities, that likely would have greatly increased our taxon count.
Many of the species reported from this study occur throughout the Lower Colorado River Basin subregion of the Sonoran Desert, but are often poorly represented in natural history collections or in digitised occurrence records. Six species recorded by us had no prior digitised records from the State of Arizona even though they are known in literature (Diclidia greeni, Horistonotus lutzi, Mulsanteus arizonensis, Niptus ventriculus, Oxycopis mariae and Ptinus paulonotatus). Many more represent the second digitised record or the first preserved specimen, as opposed to a human observation, from the State. These are notable in that they demonstrate specific examples of how digitised records both fall short of representing the full knowledge of the State's fauna, as well as the limited distributional information available for many species. It is also notable that three collecting events produced likely three undescribed species (Ahasverus sp., Allopoda sp. and Oxycopis sp.). Our specimens of Asbolus mexicanus angularis are the first reported from Maricopa County in Arizona and represent a roughly 50 mile (ca. 75 km) north-east range extension of that species. Many other species we report may represent additional notable range extensions, though the limited knowledge and digitised specimens from the region hinder more in-depth analyses.
The actual number of Coleoptera species that inhabit the Sand Tank Mountains is surely much higher than what is recorded here. Based on our experience in the region, we presume this list is no more than 30% of the actual diversity and recommend future studies should focus on flower-feeding taxa and employ other trapping techniques, such as flight-intercept traps and Lindgren funnels. Estimating species richness using rarefaction and extrapolation (Fig.
We would define the Coleoptera fauna of the Sand Tank Mountains as typical of the Lower Colorado River Basin of the Sonoran Desert. Many species we collected are typically found in arid low elevation regions of the State which is exemplified by the 30 species of Tenebrionidae collected which are highly diverse in such habitats. We postulate that the beetle fauna of the Sand Tank Mountains is likely similar to the fauna found throughout most of the low mountain ranges in the south-western portion of Arizona - but direct comparison is stifled by the lack of knowledge of those other mountain ranges.
Insect records and diversity for the ecoregions of Arizona are summarised in Fig.
Occurrence records by ecoregion from the State of Arizona. Ecoregion labels match Fig.
Insect records and collecting events for Arizona mountain ranges by geographic area are summarised in Fig.
Occurrence records by mountain range from the State of Arizona. Point labels match mountain ranges in Fig.
The most distant outlier by far is the Chiricahua Mountains (label 5 in Fig.
Analysis of the influence of proximity to roads, cities, airports and rivers is shown in Fig.
Biasing factors in relation to digitised insect records for Arizona. Proximity to roads, cities, airports and rivers are shown as inferred via sampbias (
These biasing factors together generate a model of expected sampling frequency across Arizona. Fig.
Map plotting the model of expected sampling density given calculated bias of roads, cities, airports and rivers within Arizona.
The disproportionate levels of data amongst mountain ranges discussed above demonstrate that it is too soon to accurately model insect diversity from occurrence records for most ranges. However, the Chiricahua Mountains are so disproportionately highly collected that they offer an important case study into what we can infer about insect diversity from occurrence records. Analysis of species richness for the Chiricahuas (Fig.
Species richness estimation curve for the Chiricahua Mountains in Arizona by rarefaction and extrapolation.
Scaling up to ecoregions, species richness is similarly incompletely sampled by current collecting efforts (Fig.
Species richness estimates for the entire State of Arizona again fail to plateau with the available data (Fig.
Species richness estimation curves for the entire State of Arizona by rarefaction and extrapolation.
All rarefaction and extrapolation estimates of species (or taxonomic) richness failed to plateau and provided very similar results that only 70% of the full estimated species richness were observed. As all the analyses across the three scales explored here gave these similar proportional results, it seems clear that the estimates are strongly affected by incomplete sampling. We again urge readers to be cautious with the absolute numbers presented here. However, given our knowledge of the Sand Tank Mountains Coleoptera study and its limitations along with the slopes of all rarefaction curves, the species richness estimates presented here seem to be extremely conservative counts and might be useful as a lowest-end predictor of what the true diversity is. We did not assess the diversity of collecting techniques represented in our dataset. This may mean that we are underestimating total insect taxa, even at larger scales, due to inadequate sampling techniques.
The analyses presented here clearly demonstrate that, according to available data, insect collecting has not been done evenly throughout the State. The underlying factors that drive the biases seen in the data are likely numerous and difficult to fully ascertain. We hypothesise that two of the primary drivers are habitat accessibility and social interactions.
Habitat access for insect collectors is very important and has many facets. Proximity to roads and populations centres is clearly important, but not the only limiting factor and not all cities and roads are the same. For example, the Chiricahua Mountains have roads accessible to passenger cars that go to the highest elevations. The Mountains are almost entirely on public lands and there are nearby towns with accommodation and stores, as well as a popular research station. In contrast, all sites visited in the Sand Tank Mountains involved rugged back-country roads requiring high clearance and four-wheel drive vehicles in areas where it is unlikely to encounter other people in the event of an emergency. Habitat access is not equal at the large scale of ecoregions either. The majority of the Madrean Archipelago is covered by public lands (U.S. Forest Service and Bureau of Land Management) while large swathes of the Sonoran Desert and especially the Arizona/New Mexico Plateaus regions are Native American Reservations. Different sovereign tribal lands, private property and various public land management agencies all have unique regulations and permitting processes which affect collecting insects. The Mohave Basin and Range ecoregion is an interesting example of how these factors interact where most of the lands are public, but the terrain is very rugged and roads and population centres are limited which is likely why there are so few insect records from the region even though there are no major permitting restrictions.
The Patagonia Picnic Table Effect (
The full scale of insect diversity has been under-documented for the State of Arizona, its constituent ecoregions or even its most popular mountain ranges, at least in available online data. It is important that the entomological community continues to survey for and collect insects everywhere in the State. Continuing and increasing efforts to mobilise specimen data from natural history collections also remains a high priority and will likely help to account for many species which are not currently represented in online data. It is estimated that not more than 5% of specimens in insect collections of the United States have been fully digitised (
We urge collectors to make a concerted effort to go to new places and consider targeting specifically undercollected regions and mountain ranges. Small and targeted studies can exponentially improve our understanding of Arizona insect fauna and are likely the best way to increase knowledge of species distributions and may be crucial to understanding the entire State fauna. Our example of the Sand Tank Mountains beetles highlights how a modest collecting effort can still provide new occurrence records for species from the State and report on new localities for taxa that are otherwise considered rare in collections. We do not recommend that collectors avoid the classic and popular sites; indeed, we still need to sample those, but we would advocate that entomologists consider dividing their time in the field and only spend part of their efforts in the well-known habitats and spend the next day somewhere new.
The paucity of insect data from so many mountain ranges in the State strongly limit our ability to adequately protect and conserve insect biodiversity. Entomologists and insect collections should partner with local, State and federal land management agencies to increase insect sampling throughout the State. Increasing partnerships and professional connections with tribal nations within the State are also strongly recommended. Opportunites for occurrence-data driven estimates for species diversity are in their infancy, even for a biodiversity hotspot that is accessible and popular. Nevertheless, the growing availability of occurrence data is an important resource to continue to develop to understand the diversity and distributions of insects.
Specimens from the Sand Tank Mountains were collected legally under agreement LLAZP04000 with the Bureau of Land Management, Phoenix Office responsible for the Sonoran Desert National Monument in accordance with 43 CFR 8370. We are grateful to Bill Warner (Chandler, AZ), Fred Skillman (Phoenix, AZ), Blaine Mathison (Salt Lake City, UT) and Matthew Gimmel (Santa Barbara, CA) for assisting with beetle identifications. Jay Taylor (Arizona State University) provided valuable assistance with statistical analyses. Randy Babb (Apache Junction, AZ), Karen Hajek (Cave Creek, AZ), Elizabeth Makings (Arizona State University) and K.C. Smith (Mesa, AZ) were incredibly helpful in finding collecting sites. The late David E. Brown (Arizona State University) instilled a yearning to explore all of Arizona that brought about this project. The research contributions of the following six co-authors (De Leon, Esquivel, Kerwin, Salazar, Sarmiento and Thiatmaja) were supported and made possible by the 2022 ASU Biocollections Diversity, Equity and Inclusion Summer Scholars Program which was led and financial supported by Kelsey Yule and Nico Franz and by ASU’s College of Liberal Arts and Sciences and the Biodiversity Knowledge Integration Center. We also thank Rosie Liao, Rick Overson, Dakota Rowsey and Laura Steger for their roles in planning and completing fieldwork as part of the summer scholar programme.
Zip archive of two occurrence recordsets for Arizona insects. The first file contains occurrence records annotated by which ecoregion they fall within and the second file contains annotated records by which mountain range they fall within.
This table includes data for all Arizona ecoregions including their geographic size and the number of insect records, collecting events and taxa found within them.
This table includes information about the tallest mountain ranges in Arizona. A polygon in WKT format, the geographic area, prominence and height of each mountain range is given. Totals for insect occurrence records, collection events and taxa are also given.
Darwin Core Archive of new records
This file contains graphical analyses to test the Arizona insect occurrence dataset for normality across mountain ranges and Ecoregions. Additional graphs of log-transformed data are included for untransformed analyses presented in the main text.