Biodiversity Data Journal :
Research Article
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Corresponding author: Xi Zhang (zhangxigzfa@tom.com)
Academic editor: Marcin Nobis
Received: 01 May 2024 | Accepted: 13 Jun 2024 | Published: 24 Jun 2024
© 2024 Guangneng Yang, Na Liu, Xu Zhang, Hua Zhou, Yiju Hou, Peng Wu, Xi Zhang
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Yang G, Liu N, Zhang X, Zhou H, Hou Y, Wu P, Zhang X (2024) Prediction of the potential distribution of Chimonobambusa utilis (Poaceae, Bambusoideae) in China, based on the MaxEnt model. Biodiversity Data Journal 12: e126620. https://doi.org/10.3897/BDJ.12.e126620
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Chimonobambusa utilis is a unique edible bamboo species valued for its economic and nutritional benefits. However, its existence in natural habitats is at risk due to environmental shifts and human interventions. This research utilised the maximum entropy model (MaxEnt) to predict potential habitats for Ch. utilis in China, identifying key environmental factors influencing its distribution and analysing changes in suitable habitats under future climate conditions. The results show that the results of the MaxEnt model have high prediction accuracy, with an AUC (Area Under the receiver operating characteristic Curve) value of 0.997. Precipitation in the driest month (Bio14), altitude (Alt) and isothermality (Bio03) emerged as the primary environmental factors influencing the Ch. utilis distribution. Currently, the suitable habitats area for Ch. utilis is 10.55 × 104 km2. Projections for the 2050s and 2090s indicate potential changes in suitable habitats ranging from -3.79% to 10.52%. In general, the most suitable habitat area will decrease and shrink towards higher latitude areas in the future. This study provides a scientific basis for the introduction, cultivation and conservation of Ch. utilis.
suitable habitat, the maximum entropy model (MaxEnt), Chimonobambusa utilis, bamboo distribution
Vegetation is the basis of terrestrial ecosystems and its distribution is limited by climate (
Chimonobambusa utilis, a member of the Poaceae bamboo subfamily, is a unique edible bamboo species found in south-western China (
With the advancement of scientific technology, species distribution models (SDMs) have gained popularity as valuable tools for studying the impact of climate change on species (
The study hypothesises that climate change will have a significant impact on the distribution of Ch. utilis. Based on the species' current distribution points and environmental variables from global climate models and utilising the MaxEnt model and ArcGIS 10.5, the research aims to address the following questions: (1) What are the limiting factors and distribution ranges for Ch. utilis and (2) How will suitable habitats change in the future (2050s and 2090s)? This study could provide a theoretical foundation and practical guidance for the introduction, cultivation and conservation of Ch. utilis.
China was selected as the research area to analyse the distribution of Ch. utilis. Field investigations were carried out from 2020 to 2023 to study the natural population of Ch. utilis, resulting in the collection of 582 distribution records. Additionally, a review of published literature retrieved 19 records on the natural population distribution of Ch. utilis in Yunnan and Guizhou Provinces (
In this study, a total of 19 climate variables, three terrain variables and four soil variables were utilised to develop the MaxEnt model (Table
Factor code |
Description |
Unit or description |
Alt |
Altitude |
m |
Asp |
Aspect |
- |
Slp |
Slope |
° |
Bio01 |
Annual mean temperature |
°C |
Bio02 |
Mean diurnal range (mean of monthly (max temp - min temp)) |
°C |
Bio03 |
Isothermality (Bio02/Bio07) (×100) |
ratio |
Bio04 |
Temperature seasonality (standard deviation ×100) |
standard deviation |
Bio05 |
Max temperature of warmest month |
°C |
Bio06 |
Min temperature of coldest month |
°C |
Bio07 |
Temperature annual range (Bio05-Bio06) |
°C |
Bio08 |
Mean temperature of wettest quarter |
°C |
Bio09 |
Mean temperature of driest quarter |
°C |
Bio10 |
Mean temperature of warmest quarter |
°C |
Bio11 |
Mean temperature of coldest quarter |
°C |
Bio12 |
Annual precipitation |
mm |
Bio13 |
Precipitation of wettest month |
mm |
Bio14 |
Precipitation of driest month |
mm |
Bio15 |
Precipitation seasonality (coefficient of variation) |
standard deviation |
Bio16 |
Precipitation of wettest quarter |
mm |
Bio17 |
Precipitation of driest quarter |
mm |
Bio18 |
Precipitation of warmest quarter |
mm |
Bio19 |
Precipitation of coldest quarter |
mm |
AWC |
AWC range |
mm/m |
T_oc |
Topsoil organic carbon |
% |
T_ph |
Topsoil pH (H2O) |
-log(H +) |
T_texture |
Topsoil texture |
- |
Note: * Italics text indicates the bioclimatic variables used for model construction.
In order to prevent overfitting, a comprehensive assessment of 26 climate variables was conducted. The screening process consisted of two main steps: (1) Utilising SPSS 23.0 software to examine the correlation amongst the 26 climate variables, with a threshold of 0.80 set for determination; and (2) Running MaxEnt 3.4.1 software with species distribution data and the 26 climate variables to determine the initial percentage contribution of each variable to the model. Following this, variables with a correlation coefficient above 0.80 and a lower contribution rate were excluded (
The prediction of the potential distribution area of Ch. utilis was conducted using the MaxEnt model. The MaxEnt model derived constraint conditions based on the distribution data of species and environmental factors. It assumes that the probability distribution of species emergence is closest to its actual distribution when the entropy is maximised under these constraints (
The prediction accuracy was evaluated using the receiver operating characteristic (ROC) curve and the area under the ROC (AUC). AUC values range from 0 to 1, with higher values indicating better prediction accuracy. Specific criteria were defined as follows: 0.5-0.6 for failure, 0.6-0.7 for poor, 0.7-0.8 for fair, 0.8-0.9 for good and 0.9-1 for excellent. (
The output results of the MaxEnt model were visualised using ArcGIS 10.5 software to analyse habitat suitability. Habitat suitability was assessed by categorising habitat into four levels using the natural-breaks classification method: unsuitable habitat (0-0.05), marginally suitable habitat (0.05-0.22), highly suitable habitat (0.22-0.51) and most suitable habitat (0.51-1). The suitable habitat for each province was determined by overlaying administrative divisions with suitable areas. Finally, a transfer matrix was utilised to analyse the relationship between the current suitable habitat and the future suitable habitat.
The MaxEnt model was utilised to predict potentially suitable habitats for Ch. utilis. The evaluation of the ROC curve results showed that the average AUC value of the training data was 0.997, indicating high reliability in the prediction outcomes. (Fig.
The precipitation in the driest month (Bio14) made the highest percentage contribution to the prediction model at 45.70%. This was followed by altitude (Alt) and isothermality (Bio03), which contributed 33.60% and 17.70%, respectively, resulting in a cumulative contribution of 97.00%. The contributions of the other factors were minimal (Table
The curve of the distribution probability and environmental factor response, as shown in Fig.
The total suitable area of Ch. utilis in China under the current climate was 10.55 × 104 km2 (Table
Prediction of suitable areas for Ch. utilis under future climate scenarios.
Scenarios |
Marginally Suitable |
Highly Suitable |
Most Suitable |
Total Suitable |
(104 km2) |
(104 km2) |
(104 km2) |
(104 km2) |
|
Current |
7.54 |
2.16 |
0.85 |
10.55 |
2050s-SSP1 |
7.22 |
2.06 |
0.87 |
10.15 |
2050s-SSP2 |
7.63 |
2.16 |
0.80 |
10.59 |
2050s-SSP5 |
7.62 |
2.22 |
0.83 |
10.67 |
2090s-SSP1 |
7.72 |
2.00 |
0.72 |
10.44 |
2090s-SSP2 |
7.99 |
2.38 |
0.83 |
11.20 |
2090s-SSP5 |
8.57 |
2.30 |
0.79 |
11.66 |
The most suitable habitat area was 0.85 × 104 km2, accounting for 8.06% of the total suitable area. These habitats were primarily located in the junctional areas of Yunnan, Guizhou, Sichuan Provinces and Chongqing Municipality, specifically in the Daloushan Mountains and Wumeng Mountains. The highly suitable habitat area was 2.16 × 104 km2, making up 20.47% of the total suitable area. These habitats were mainly found in north-eastern Yunnan Provinces, south-eastern Sichuan Provinces, the central and northern parts of Guizhou Provinces, and the southern and northern parts of Chongqing Municipality. The marginally suitable habitat area was 7.54 × 104 km2, accounting for 71.47% of the total suitable area. It is predominantly found in south-western Hubei Province, southern Shaanxi Province, north-eastern Chongqing Municipality, north-eastern Yunnan Province, south-eastern Sichuan Province and most of Guizhou Province. A comparison with the natural distribution revealed that the model predicted a much larger range. Despite some deviations, the core distribution area matched the current distribution area.
We predicted the potential distribution of Ch. utilis in China in two future periods (2050s and 2090s) and three greenhouse gas scenarios (SSP1, SSP2 and SSP5).
In the 2050s and 2090s, the total suitable habitat area for Ch. utilis decreased by 3.79% and 1.04%, respectively, under the SSP1 scenario, reaching 10.15 × 104 km2 and 10.44 × 104 km2, respectively (Table
To highlight the changes in suitable area between the current and future scenarios, we used a transition matrix to analyse internal changes (in the current and 2090s) without considering the total area of unsuitable areas.
Under the SSP1 scenario, the area of grade change from the present to the 2090s was 11.27 × 104 km2 (Table
Transfer matrix of the suitable habitat area (current and 2090s-SSP1 scenario).
Period |
2090s-SSP1 |
|||||
Grade |
Unsuitable |
Marginally suitable |
Highly suitable |
Most suitable |
Total transferred |
|
(104 km2) |
(104 km2) |
(104 km2) |
(104 km2) |
(104 km2) |
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Current |
Unsuitable (104 km2) |
- |
0.72 |
0.00 |
0.00 |
0.72 |
Marginally suitable (104 km2) |
0.83 |
6.50 |
0.21 |
0.00 |
7.54 |
|
Highly suitable (104 km2) |
0.00 |
0.50 |
1.59 |
0.07 |
2.16 |
|
Most suitable (104 km2) |
0.00 |
0.00 |
0.20 |
0.65 |
0.85 |
|
Total transferred |
0.83 |
7.72 |
2.00 |
0.72 |
11.27 |
Under the SSP2 scenario, the area of grade change from the present to the 2090s was 11.81 × 104 km2 (Table
Transfer matrix of suitable habitat area (current and 2090s-SSP2 scenario).
Period |
2090s-SSP2 |
|||||
Grade |
Unsuitable |
Marginally Suitable |
Highly Suitable |
Most suitable |
Total transferred |
|
(104 km2) |
(104 km2) |
(104 km2) |
(104 km2) |
(104 km2) |
||
Current |
Unsuitable (104 km2) |
- |
1.25 |
0.01 |
0.00 |
1.26 |
Marginally Suitable (104 km2) |
0.61 |
6.40 |
0.53 |
0.00 |
7.54 |
|
Highly Suitable (104 km2) |
0.00 |
0.34 |
1.70 |
0.12 |
2.16 |
|
Most Suitable (104 km2) |
0.00 |
0.00 |
0.14 |
0.71 |
0.85 |
|
Total transferred |
0.61 |
7.99 |
2.38 |
0.83 |
11.81 |
Under the SSP5 scenario, the area of grade change from the present to the 2090s was 12.17 × 104 km2 (Table
Transfer matrix of suitable habitat area (current and 2090s-SSP5 scenario).
Period |
2090s-SSP5 |
|||||
Grade |
Unsuitable Suitable |
Marginally Suitable |
Highly Suitable |
Most suitable |
Total transferred |
|
(104 km2) |
(104 km2) |
(104 km2) |
(104 km2) |
(104 km2) |
||
Current |
Unsuitable (104 km2) |
- |
1.62 |
0.00 |
0.00 |
1.62 |
Marginally Suitable (104 km2) |
0.51 |
6.65 |
0.38 |
0.00 |
7.54 |
|
Highly Suitable (104 km2) |
0.00 |
0.30 |
1.77 |
0.09 |
2.16 |
|
Most Suitable (104 km2) |
0.00 |
0.00 |
0.15 |
0.70 |
0.85 |
|
Total transferred |
0.51 |
8.57 |
2.30 |
0.79 |
12.17 |
Amongst the 11 environmental factors considered in the modelling process, precipitation had the highest total contribution rate at 46.00%, followed by terrain at 33.70%, temperature at 19.10% and soil at 1.20% (Table
Under the current climate, the total suitable habitat area for Ch. utilis in China is 10.55×104 km2 (Table
From the current to the 2050s, the area of Ch. utilis varied from -3.79% to 1.14%, with a noticeable expansion only observed under the SSP5 scenario. Moving forward to the 2090s, the suitable habitat area for Ch. utilis varied from -1.04% to 10.52%, showing an expansion trend under both the SSP2 and SSP5 scenarios (Table
Our study revealed that the optimal habitats for Ch. utilis are primarily situated at the junctional regions of Yunnan, Guizhou, Sichuan Provinces and Chongqing Municipality, specifically within the Daloushan Mountains and Wumeng Mountains under both current and future climatic scenarios. The distribution of Ch. utilis is mainly influenced by precipitation in the driest month (Bio14), altitude (Alt) and isothermality (Bio03). While the total number of suitable habitats for Ch. utilis may slightly increase in the future, the overall range is not expected to change significantly. However, the most suitable habitat area is anticipated to decrease in the future. We recommend utilising the most suitable habitats as breeding grounds for germplasm resources, enhancing the investigation of germplasm resources and promoting large-scale artificial cultivation in highly suitable habitats. Additionally, conducting introduction experiments in marginally suitable habitats could provide valuable insights into how Ch. utilis responds to climate change.
Forestry Administration of Guizhou Province (Qianlinkehe [2022] 03 and telinyan NO. 2022-02), National Key R&D Program of China (NO. 2016YFC0502605).
The authors have declared that no competing interests exist.