Biodiversity Data Journal :
Data Paper (Biosciences)
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Corresponding author: Rei Itsukushima (itsukushima@civil.kyutech.ac.jp)
Academic editor: Yahui Zhao
Received: 29 Jan 2025 | Accepted: 01 Mar 2025 | Published: 14 Mar 2025
© 2025 Rei Itsukushima, Mohd Shalahuddin Adnan, Yuta Tomiyama, Yuichi Kano, Keigo Otsu, Muhamad Firdaus Zanorin
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Itsukushima R, Adnan MS, Tomiyama Y, Kano Y, Otsu K, Zanorin MF (2025) Database of Ichthyofauna in urban streams of Johor Bahru, Malaysia. Biodiversity Data Journal 13: e148173. https://doi.org/10.3897/BDJ.13.e148173
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Urbanisation leads to the degradation of ecosystems through various factors, such as the deterioration of water quality, changes in water and material cycles and the degradation of biological habitats. Amongst these, aquatic organisms are particularly affected by the loss of habitats due to river canalisation and the impacts of invasive species. It has been widely reported that, in regions where invasive species have been introduced and native species have declined, homogenisation of fish populations occurs, resulting in a significant reduction in biodiversity. This loss of diversity disrupts the ecosystem’s stability and resilience, further compounding the negative effects of urbanisation on aquatic environments. However, the impact of urbanisation on fish populations varies depending on the local ecosystem and the degree of urbanisation, necessitating the examination of ecosystem changes induced by urbanisation in each specific region. The Peninsula Malaysia, which is the focus of this study, is a global hotspot for freshwater biodiversity. However, the effects of urbanisation on fish populations in this region have been scarcely studied. The Masai River Basin, which is the subject of this investigation, is located in the Iskandar Development Region, an area undergoing rapid urbanisation. Understanding the consequences of urbanisation on the fish populations and broader ecosystems in this region is critical for providing information for future conservation and management strategies.
A fish survey was conducted at 19 sites in the Masai River Basin, which is an urbanised watershed, focusing on river channels that have been straightened or converted into concrete-lined waterways. Additionally, fish surveys were conducted at eight sites in non-urbanised areas for comparison. The survey resulted in the collection of nine orders, 15 families, 28 genera, 32 species and a total of 3,007 individuals. In the urbanised sites, the proportion of native species in the total catch was extremely low, averaging only 10.4% across all sites, with invasive species making up the majority of the individuals captured. This indicates the significant shift in species composition due to urbanisation and the dominance of non-native species in these environments. On the other hand, in the non-urbanised areas, the proportion of native species was high at 88.7%, highlighting the significant impact of urbanisation on the invasion of non-native species. Particularly in the downstream areas of the urbanised watershed, species such as Poecilia sphenops, Mayaheros urophthalmus and Poecilia reticulata were frequently captured. In contrast, at sites in the upstream areas where forested habitats remained intact, native species listed on the IUCN Red List, such as Parambassis siamensis and Clarias batrachus, were captured. The study revealed that urbanisation and development in the targeted watershed are progressing rapidly, underscoring the urgent need for the conservation and restoration of habitats for these native species.
urban stream, Peninsula Malaysia, fish fauna, mon-native species
In monsoon Asia, environmental degradation, such as the intensification of disasters due to climate change and the decline of biodiversity caused by development, is raising concerns about the sustainability of human societies (
Urban development in Malaysia has been significant, with the urban population in Peninsular Malaysia rising rapidly from 34% in 1980 to 71% in 2010 (
In recent years, the importance of the ecosystem services provided by urban rivers has been increasingly recognised (
The Masai River Basin in Johor Bahru, which is the focus of this study, is located within the Iskandar Development Region (Iskandar Malaysia), established in 2006 under the 9th Malaysia Plan. This area is undergoing rapid urbanisation (
This survey was conducted in the Masai River Basin, located in the southern part of Johor Bahru, Malaysia, covering 19 sites along urban rivers in the Basin and eight surrounding non-urbanised sites. The Masai River is a 7 km-long main river course that flows into the Johor Straits, with a drainage area of 26 km² (Fig.
The fishes were collected by hand nets and throwing nets (cast nets) at each habitat (rapid, run, glide, shallows and pool). For each habitat, approximately 20 net casts (half mesh 5.0 mm, 14.0 m in circumference) and 30 min of sampling with a hand net (500 mm in diameter, 6 mm mesh) were conducted. In this study, a total of 3,007 occurrences were recorded, with species identified both on-site and in the laboratory according to
Surveys were conducted at 19 sites in the Masai River Basin in Johor Bahru, Malaysia, focusing on river channels that have been straightened or converted into concrete channels due to urbanisation. Additionally, surveys were carried out at eight sites in the surrounding non-urbanised watersheds to compare the impact of urbanisation on the fish populations and river ecosystems.
1.48112 and 1.88235 Latitude; 103.99474 and 103.77058 Longitude.
As a result of the surveys, 15 families, 28 genera, 32 species and 3,007 individuals were collected from the 34 habitats of 27 stations. The highest number of species was 10 (sites belonging to the Tiram River) and the highest number of individuals was 756 (site belonging to the Masai River). By contrast, fish were not confirmed in the site belonging to the Masai River. The highest number of individuals found was 1,447 of Poecilia sphenops, which appeared in nine stations.
The orders were Cypriniformes (13 species), Siluriformes (6 species), Cyprinodontiformes (4 species), Perciformes (4 species), Cichliformes (3 species), Anabantiformes (3 species), Beloniformes (1 species), Gobiiformes (1 species) and Synbranchiformes (1 species) (Fig.
Amongst the species confirmed, Amphilophus trimaculatus (Günther, 1867), Geophagus sveni (Lucinda, Lucena & Assis, 2010), Mayaheros urophthalmus (Günther, 1862), Poecilia sphenops (Valenciennes, 1846), Gambusia affinis (S. F. Baird & Girard, 1853), Poecilia reticulata (W. Peters, 1859), Puntius pentazona (Boulenger, 1894), Cichla kelberi (Kullander & Ferreira, 2006), Clarias gariepinus (Burchell, 1822) and Pterygoplichthys disjunctivus (Weber, 1991) are considered to be invasive species.
According to the IUCN Red List in 2014, the following species were determined as LC (Least Concern): Channa striata (Bloch, 1793), Betta imbellis (Ladiges, 1975), Trichopsis vittata (G. Cuvier, 1831), Dermogenys siamensis (Fowler, 1934), Aplocheilus panchax (F. Hamilton, 1822), Barbodes lateristriga (Valenciennes, 1842), Barbodes rhombeus (Kottelat, 2000), Cyclocheilichthys apogon (Valenciennes, 1842), Danio albolineatus (Blyth, 1860), Esomus metallicus (Ahl, 1923), Parachela maculicauda (Smith, 1934), Rasbora borapetensis (Smith, 1934), Rasbora dusonensis (Bleeker, 1850), Rasbora elegans (Volz, 1903), Rasbora trilineata (Steindachner, 1870), Parambassis siamensis (Fowler, 1937), Oxyeleotris marmorata (Bleeker, 1852), Trichogaster trichopterus (Pallas, 1770), Clarias batrachus (Linnaeus, 1758), Clarias nieuhofii (Valenciennes, 1840) and Monopterus albus (Zuiew, 1793). Additionally, Labiobarbus festivus (Heckel, 1843) is listed as DD (Data Deficient).
Rank | Scientific Name |
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species | Channa striata (Bloch, 1793) |
species | Betta imbellis Ladiges, 1975 |
species | Trichopsis vittata (G. Cuvier, 1831) |
species | Dermogenys siamensis Fowler, 1934 |
species | Amphilophus trimaculatus (Günther, 1867) |
species | Geophagus sveni Lucinda, Lucena & Assis, 2010 |
species | Mayaheros urophthalmus (Günther, 1862) |
species | Poecilia sphenops (Valenciennes, 1846) |
species | Gambusia affinis (S. F. Baird & Girard, 1853) |
species | Poecilia reticulata W. Peters, 1859 |
species | Barbodes lateristriga (Valenciennes, 1842) |
species | Barbodes rhombeus (Kottelat, 2000) |
species | Cyclocheilichthys apogon (Valenciennes, 1842) |
species | Danio albolineatus (Blyth, 1860) |
species | Esomus metallicus Ahl, 1923 |
species | Labiobarbus festivus (Heckel, 1843) |
genus | Labiobarbus van Hasselt, 1823 |
species | Parachela maculicauda (Smith, 1934) |
species | Puntius pentazona (Boulenger, 1894) |
species | Rasbora borapetensis Smith, 1934 |
species | Rasbora dusonensis (Bleeker, 1850) |
species | Rasbora elegans Volz, 1903 |
species | Rasbora trilineata Steindachner, 1870 |
genus | Brachygobius Bleeker, 1874 |
species | Parambassis siamensis (Fowler, 1937) |
species | Oxyeleotris marmorata Bleeker, 1852 |
species | Cichla kelberi Kullander & Ferreira, 2006 |
species | Trichogaster trichopterus (Pallas, 1770) |
genus | Hemibagrus Valenciennes, 1840 |
species | Clarias batrachus (Linnaeus, 1758) |
species | Clarias gariepinus Burchell, 1822 |
species | Clarias nieuhofii Valenciennes, 1840 |
genus | Clarias Scopoli, 1777 |
species | Pterygoplichthys disjunctivus (Weber, 1991) |
species | Monopterus albus (Zuiew, 1793) |
Surveys were conducted at 19 sites in the Masai River Basin in Johor Bahru, Malaysia, focusing on river channels that have been straightened or converted into concrete channels due to urbanisation. Additionally, surveys were carried out at eight sites in the surrounding non-urbanised watersheds to compare the impact of urbanisation on the fish populations and river ecosystems.
Column label | Column description |
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occurrenceID | An identifier for the Occurrence. |
basisOfRecord | The specific nature of the data record. |
samplingProtocol | The names of, references to, or descriptions of the methods or protocols used during an Event. |
eventDate | The date-time or interval during which an Event occurred. |
scientificName | The full scientific name. |
scientificNameAuthorship | The authorship information for the scientificName formatted according to the conventions of the applicable nomenclaturalCode. |
kingdom | The full scientific name of the kingdom in which the taxon is classified. |
phylum | The full scientific name of the phylum or division in which the taxon is classified. |
class | The full scientific name of the class in which the taxon is classified. |
order | The full scientific name of the order in which the taxon is classified |
family | The full scientific name of the family in which the taxon is classified. |
taxonRank | The taxonomic rank of the most specific name in the scientificName as it appears in the original record. |
identifiedBy | A list (concatenated and separated) of names of people, groups or organisations who assigned the Taxon to the subject. |
recordedBy | A list (concatenated and separated) of the globally unique identifier for the person, people, groups or organisations responsible for recording the original Occurrence. |
decimalLatitude | The geographic latitude (in decimal degrees, using the spatial reference system given in geodeticDatum) of the geographic centre of a Location. |
decimalLongitude | The geographic longitude (in decimal degrees, using the spatial reference system given in geodeticDatum) of the geographic centre of a Location. |
habitat | A category or description of the habitat in which the dwc:Event occurred. |
coordinateUncertaintyInMetres | The horizontal distance (in metres) from the given decimalLatitude and decimalLongitude describing the smallest circle containing the whole of the Location. |
geodeticDatum | The ellipsoid, geodetic datum or spatial reference system (SRS), upon which the geographic coordinates given in decimalLatitude and decimalLongitude are based. |
countryCode | The standard code for the country in which the Location occurs. Recommended best practice is to use ISO 3166-1-alpha-2 country codes. |
individualCount | The number of individuals represented present at the time of the Occurrence. |
occurrenceStatus | A statement about the presence or absence of a Taxon at a Location. |
catalogNumber | A list (concatenated and separated) of previous or alternative fully qualified catalogue numbers or other human-used identifiers for the same Occurrence, whether in the current or any other dataset or collection. |
language | A language of the resource. Recommended best practice is to use a controlled vocabulary, such as RFC 4646 [RFC4646]. |
country | The name of the country or major administrative unit in which the Location occurs. Recommended best practice is to use a controlled vocabulary, such as the Getty Thesaurus of Geographic Names. |
stateProvince | The name of the next smallest administrative region than country (state, province, canton, department, region etc.) in which the Location occurs. |
municipality | The full, unabbreviated name of the next smallest administrative region than county (city, municipality etc.) in which the Location occurs. Do not use this term for a nearby named place that does not contain the actual location. |
waterBody | The name of the water body in which the dcterms:Location occur. |
modified | The most recent date-time on which the resource was changed. For Darwin Core, recommended best practice is to use an encoding scheme, such as ISO 8601:2004(E). |
year | The four-digit year in which the Event occurred, according to the Common Era Calendar. |
month | The ordinal month in which the Event occurred. |
day | The integer day of the month on which the Event occurred. |
establishmentMeans | Statement about whether a dwc:Organism has been introduced to a given place and time through the direct or indirect activity of modern humans. |
dynamicProperties | A list of additional measurements, facts, characteristics or assertions about the record. Meant to provide a mechanism for structured content. |
The results of this survey identified 23 species of natives in 18 genera and natives in three genera which were not identifiable to species, for a total of 20 native genera. Further, we identified nine species of introduced fish in eight genera and introduced species in one already-seen genus which was not identifiable to species. The comparison of the number of non-native species between urban and non-urban areas revealed that the urban area had an average of 2.8 ± 1.4 species (mean ± standard deviation), while the non-urban area had 0.6 ± 1.2 species. A significant difference was observed in the results of the t-test (Fig.
Amongst the non-native species, Poecilia sphenops was the most abundant, with 1,447 individuals captured in the urban watershed, accounting for approximately 48% of the total number of fish collected in this survey. Poecilia sphenops is a species native to Central and South America and from Mexico to Colombia (
The next most abundant species captured was Mayaheros urophthalmus, with 430 individuals collected. Mayaheros urophthalmus is native to tropical America (
Within urban watersheds, the proportion of non-native species also varied. In areas where urbanisation was concentrated downstream, many sites were dominated by non-native species, while in upstream areas with remaining forests, native species listed on the Red List, such as Parambassis siamensis and Clarias batrachus, were confirmed. This phenomenon, where rare species emerge from the small remnants of non-urban environments within urban watersheds, has been reported in other climate zones as well (