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Biodiversity Data Journal :
Data Paper (Biosciences)
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Corresponding author: Claudia S. Maturana (claudiamaturana@uchile.cl)
Academic editor: Huw Griffiths
Received: 02 Jun 2026 | Accepted: 07 Aug 2026 | Published: 01 Oct 2026
© 2026 Fernando Moya, Claudia Maturana, Sebastian Rosenfeld, Melanie Delleuze, Guillaume Schwob, Camila Neder, Paul Brickle, Thomas Saucède, Léa Cabrol, Karin Gerard, Angie Díaz, Elie Poulin
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Moya F, Maturana CS, Rosenfeld S, Delleuze M, Schwob G, Neder C, Brickle P, Saucède T, Cabrol L, Gerard K, Díaz A, Poulin E (2026) Some temporal and geographic records of Abatus species (Echinoidea, Schizasteridae) in Antarctic and Subantarctic environments. Biodiversity Data Journal 14: e202389. https://doi.org/10.3897/BDJ.14.e202389
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The study of biodiversity distribution is essential for its conservation. In particular, knowledge gaps concerning the distribution of Antarctic and Subantarctic benthos lead us to undertake research initiatives. Platforms such as GBIF allow us to gather geographical information, standardise it and subsequently analyse it in a reproducible manner. Here, we present a dataset created in GBIF, which shows an occurrence compilation of three species of the genus Abatus (Troschel, 1851). The records collated were organised at the specimen level and collected by project from different countries and dates. The aim of this work is to curate these samples and records, contributing to the knowledge of the biogeographical distribution of these three species across three different macrozones (southern Patagonia, Subantarctic islands and Antarctica).
The occurrence dataset presented here has never been released before and is the result of a rigorous compilation and curation of records to document the distribution of species within the genus Abatus across the Southern Ocean. We compiled data from field collections and taxonomic research carried out between 2004 and 2024. The dataset includes 27 occurrences of three recognised species (Abatus agassizii (Mortensen, 1910); Abatus cavernosus (Philippi, 1845); and Abatus cordatus (Verrill, 1876)) and two occurrences of Abatus identified only at genus level (Abatus sp.), which were obtained from multiple locations including the Magellan Strait, Kerguelen Islands, Falkland/Malvinas Islands, South Georgia and South Shetland Islands. All records were georeferenced and curated by experts from the Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE) and associated institutions. The dataset has been published through the Global Biodiversity Information Facility (GBIF) and is accessible under a CC-BY 4.0 licence. This work was supported by various research programmes and contributes to international biodiversity initiatives focused on the Southern Ocean.
distribution, echinoids, marine invertebrates, occurrence, sea urchins, Southern Ocean, specimen
Studying species distribution is a central focus of ecology and biogeography as it addresses scientific issues about why species occur where they do, why they are absent from other areas, and the underpinning factors of these patterns (
In Antarctic and Subantarctic Regions, numerous factors cause spatial variability in species distributions and environmental conditions may differ greatly even between nearby locations, while remaining homogeneous over larger areas (
Abatus is a genus of irregular sea urchins (family Schizasteridae) distributed mainly in the Southern Ocean. These urchins are deposit feeders with an infaunal lifestyle, ingesting surface sediment to feed on detritus and inhabiting the subtidal zone down to approximately 1000 m depth (
This dataset was compiled as part of the first author's Master's thesis and the principal investigator's ongoing research. The main goal of the dataset is to establish a baseline of the biogeographic distribution of the three Abatus species. This baseline complements current research on the biogeography of the genus Abatus being carried out at the Laboratory of Molecular Ecology (LEM) at the University of Chile.
Some temporal and geographic records of Abatus species (Echinoidea, Schizasteridae) in Antarctic and Subantarctic environments
Fernando Moya, Claudia Maturana, Sebastian Rosenfeld, Melanie Delleuze, Guillaume Schwob, Camila Neder, Paul Brickle, Thomas Saucède, Léa Cabrol, Angie Díaz, Karin Gerard and Elie Poulin
The study area corresponds to shallow coastal waters in the subtidal zone of Antarctic and Subantarctic regions.
ANID-Programa Iniciativa Científica Milenio-ICN2021_002, FONDECYT Regular 1161358 and 1211672, IPEV project n°1044 PROTEKER, South Atlantic Environmental Research Institute (SAERI) and Fondecyt Postdoctoral project 3100139.
Samples were collected through various projects and expeditions in the Magellan Strait (Patagonia, South America), the Kerguelen Islands (several sites during the Proteker project campaigns 1, 5, 8 and 9), the Falkland/Malvinas Islands, South Georgia (with logistical support of the South Atlantic Environmental Research Institute) and the South Shetland Islands during Antarctic Scientific Expeditions (ECA), supported by the Chilean Antarctic Institute (2004–2024) (Fig.
Distribution of Abatus occurrences in the Antarctic and Subantarctic zones (
To sample the Abatus species, two complementary collection techniques were employed: 1) hand-picking in the infralittoral zone at low tide and 2) Self-Contained Underwater Breathing Apparatus (SCUBA) diving to sample subtidal habitat at depths of 1-20 m. Depending on the sampling campaign, collected specimens were transported to research vessels or scientific stations with in situ seawater. They were subsequently preserved in 95% ethanol in the onboard or station laboratories.
Through field surveys, accessible sites with specific environmental conditions (sediment type, grain size and protection from waves) were selected for sampling. Within each site, if the subtidal zone was shallow, samples were taken by hand at random points . If the subtidal zone was deep, SCUBA diving surveys were carried out systematically spaced at approximately 100 metres for Falkland/Malvinas Islands, Magellan Strait, South Shetlands Islands and South Georgia sites and 500 metre intervals for Kerguelen sites, ensuring methodical spatial coverage. After sampling, all specimens were preserved in 95% ethanol for both morphological and molecular analyses and were stored at room temperature. The GPS coordinates were recorded for each occurrence to ensure accurate georeferencing. To reduce any taxonomic misidentification, each urchin was revised by experts in the group and identified, based on diagnostic morphological characteristics following literature and the online taxonomic key "Antarctic Echinoidea".
The step-by-step methodology details of each project can be obtained from their respective researchers through the provided contact information (email) in the GBIF dataset.
This dataset encompasses records of Abatus species from five main regions across the Southern Ocean (Fig.
−64.876 and −48.935 Latitude; −69.478 and 70.219 Longitude.
This dataset includes three species of the genus Abatus (order Spatangoida; family Schizasteridae) of the eleven species currently recognised in this genus (
Dorsal (aboral) views of Abatus species recorded in this study. [A] Abatus agassizii from maritime Antarctica; [B] Abatus cordatus from Kerguelen Islands; [C] Abatus cavernosus from Patagonia; [D] Abatus sp. from Falkland/Malvinas Islands; and [E] Abatus sp. from South Georgia with its test exposed (cleaned). Anterior (a), posterior (p), left side (L) and right side (R) of all the individuals are shown.
| Rank | Scientific Name | Common Name |
|---|---|---|
| species | Abatus agassizii | heart urchins |
| species | Abatus cavernosus | heart urchins |
| species | Abatus cordatus | heart urchins |
This dataset includes occurrence records of Abatus species from 2004 to 2024. The Antarctic Scientific Expeditions (ECAs) allowed sampling of A. agassizii in the Antarctic sector during 2004, 2006, 2009, 2010, 2011, 2017, 2020 and 2024. The PROTEKER campaigns provided samples of A. cordatus in different areas of the Kerguelen Islands during 2011, 2019 and 2021. Expeditions to the Magellan Strait during 2022, 2023 and 2024 allowed the collection of the species A. cavernosus. Finally, occurrences from South Georgia and the Falkland/Malvinas Islands were recorded only in 2021 and 2022, respectively (Fig.
Number of occurrence records per species between 2004 and 2024. The bars represent the annual number of occurrence records for each Abatus species (left y-axis), colour-coded according to the Abatus species. The dashed grey line indicates the cumulative occurrences across all species over time (right y-axis). These temporal patterns reflect the availability of records within the dataset and are highly influenced by uneven historical sampling effort amongst years.
This work is licensed under a Creative Commons Attribution (CC-BY 4.0) Licence.
The data presented here are available through the Global Biodiversity Information Facility (
| Column label | Column description |
|---|---|
| occurrenceID | Unique identifier for each occurrence per taxa. |
| basisOfRecord | The specific nature of the data record. We used the recommended best practice of one of the Darwin Core classes. |
| institutionCode | Unique identifier for the institution having custody of the object(s) or information referred to in the record. |
| collectionCode | The code identifying the collection from which the record was derived. |
| catalogNumber | An unique identifier for the record within the dataset. |
| type | The nature of the resource or record. For example, physical object, image, sound or event. |
| language | The language of the description of different localities. |
| collectionID | The identifier for the collection or dataset from which the record was derived. |
| occurrenceRemarks | Additional comments, notes or information on the biologicalrecord. |
| recordedBy | A person or a list of names of people responsible for recording the original Occurrence. |
| individualCount | The number of individuals present at the time of the Occurrence when it is countable. |
| sex | The sex of the biological individual(s) represented in the dwc:Occurrence. |
| lifeStage | The age class or life stage of the dwc:Organism(s) at the time the dwc:Occurrence was recorded. |
| preparations | A list concatenated and separated of preparations and preservation methods for the specimen. |
| eventID | An identifier for the set of information associated with a dwc:Event (something that occurs at a place and time). |
| samplingProtocol | The methods or protocols used during a dwc:Event. |
| samplingEffort | The amount of effort expended during a dwc:Event. In this case, time. |
| eventDate | The date-time when the event was recorded. We used best practice using the ISO 8601:1:2019. |
| eventTime | The time or interval during which a dwc:Event occurred. |
| year | The four-digit year in which the Occurrence was recorded, according to the Common Era Calendar. |
| month | The integer month in which the Occurrence was recorded. |
| day | The integer day of the month on which the dwc:Event occurred. |
| verbatimEventDate | The verbatim original representation of the date and time information for a dwc:Event. |
| habitat | A category or description of the habitat in which the dwc:Event occurred. |
| fieldNotes | Text of notes taken in the field about the dwc:Event. |
| continent | The name of the continent in which the dcterms:Location occurs. |
| island | The name of the island which the Location occurs. |
| country | The name of the country or major administrative unit in which the Location occurs. |
| countryCode | The standard code for the country in which the Location occurs following the best practice using an ISO 3166-1-alpha-2 country code. |
| stateProvince | The name of the next smaller administrative region than country. |
| locality | The specific description of the place in which the collection was made. |
| verbatimDepth | The original description of the depth below the local surface. |
| minimumDepthInMetres | The lesser depth below the local surface in metres. |
| maximumDepthInMetres | The greater depth below the local surface in metres. |
| verbatimLatitude | The verbatim original latitude of the dcterms:Location. |
| verbatimLongitude | The verbatim original longitude of the dcterms:Location. |
| verbatimCoordinateSystem | The verbatim original spatial coordinates of the Location. |
| decimalLatitude | The geographic latitude in decimal degrees of the geographic centre of a Location. Positive values are north of the Equator, negative values are south of it. Legal values lie between -90 and 90, inclusive. |
| decimalLongitude | The geographic longitude in decimal degrees of the geographic centre of a Location. Positive values are east of the Greenwich Meridian, negative values are west of it. Legal values lie between -180 and 180, inclusive. |
| geodeticDatum | The geodetic datum upon which the geographic coordinates given in decimalLatitude and decimalLongitude are based. |
| coordinateUncertaintyInMetres | The horizontal distance in metres from the given decimalLatitude and decimalLongitude describing the smallest circle containing the whole of the Location. |
| coordinatePrecision | A decimal representation of the precision of the coordinates given in the dwc:decimalLatitude and dwc:decimalLongitude. |
| georeferencedBy | A person or a list concatenated and separated of names of people who determined the georeference for the Location. |
| identifiedBy | A person or a list of names of people responsible for the taxonomic identification of the samples or records. |
| dateIdentified | The date on which the subject was determined as representing the dwc:Taxon. |
| taxonID | An identifier for the set of dwc:Taxon information. |
| scientificName | The full scientific name in the lowest level taxonomic rank that was determined and the author of the first description. |
| kingdom | The full scientific name of the kingdom in which the taxon is classified. |
| phylum | The full scientific name of the phylum in which the taxon is classified. |
| class | The full scientific name of the class in which the taxon is classified. |
| order | The full scientific name of the order in which the taxon is classified. |
| family | The full scientific name of the family in which the taxon is classified. |
| genus | The full scientific name of the genus in which the taxon is classified. |
| specificEpithet | The name of species epithet of the scientificName. |
| taxonRank | The taxonomic rank of the most specific name in the scientificName. |
| scientificNameAuthorship | The authorship information for the scientificName formatted according to the conventions of the applicable nomenclaturalCode. |
This work consolidates two decades (2004–2024) of georeferenced occurrences for three Abatus species across five sectors of the Southern Ocean from various Antarctic and Subantarctic research campaigns, providing a brief, but explicit spatio-temporal baseline for future ecological, biogeographic and conservation analyses (
However, unresolved phylogenetic relationships and morphological similarities amongst Abatus species have led to erroneous identifications and problems in the taxonomic accuracy within this genus (
The life-history of Abatus (direct development, maternal brooding and absence of pelagic larvae) constrains dispersal and gene flow, favouring fine-scale spatial genetic structure and demographic sensitivity to habitat fragmentation (
Methodologically, open biodiversity aggregators (OBIS, GBIF) are indispensable to contextualise Southern Ocean biodiversity, but exhibit strong spatial, temporal and taxonomic biases due to remoteness, logistics and route-based sampling. We therefore advocate routine occurrence-data QA/QC (e.g. CoordinateCleaner pipelines for georeferencing artefacts; depth/land–sea mismatch checks and institutional centroid filters) before downstream analyses (e.g. Species Distribution Models, range metrics). At the Southern Ocean scale, Species Distribution Models for benthic taxa should be constructed with careful bias correction and environmental realism (substrate, bathymetry, near-bottom climatologies) (
Taken together, our dataset: (i) documents persistent populations at key localities for A. cordatus and A. agassizii; (ii) highlights taxonomic uncertainty in the Falkland/Malvinas Islands and South Georgia where integrative work is needed; (iii) provides curated inputs for bias-aware SDMs and future monitoring; and (iv) establishes a reproducible baseline against which to test hypotheses about brooder vulnerability, range dynamics and conservation status across the Southern Ocean (
This work was funded by ANID – Millennium Science Initiative Program – ICN2021_002, ANID/BASAL FB210018, from Cape Horn International Center (CHIC). F.M. thanks ANID Becas/Magíster Nacional 22250841 for funding his postgraduate studies. Additionally, thanks to programme n°1044 Proteker from the French Polar Institute (IPEV) and South Atlantic Environmental Research Institute (SAERI) for access to samples from the Kerguelen Islands and Falkland/Malvinas Islands, respectively. This work was supported and funded by different projects, including FONDECYT Regular 1161358 and 1211672 (Chilean National Research Agency, ANID), ICN2021_002, IPEV PROTEKER n°1044, SAERI and FONDECYT Postdoctoral 3100139.