Biodiversity Data Journal :
Data Paper (Biosciences)
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Corresponding author: Luz Piedad Romero-Duque (luz.romero@udca.edu.co)
Academic editor: Thomas L.P. Couvreur
Received: 14 May 2019 | Accepted: 22 Aug 2019 | Published: 30 Aug 2019
© 2019 Luz Romero-Duque, Jesion Rosero-Toro, Mateo Fernández-Lucero, Andrea Simbaqueba-Gutierrez, Caterinne Pérez
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Romero-Duque LP, Rosero-Toro JH, Fernández-Lucero M, Simbaqueba-Gutierrez A, Pérez C (2019) Trees and shrubs of the tropical dry forest of the Magdalena river upper watershed (Colombia). Biodiversity Data Journal 7: e36191. https://doi.org/10.3897/BDJ.7.e36191
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We describe the database of trees and shrubs of tropical dry forest patches of the Magdalena upper river basin in Colombia, preserved in the Herbarium of Universidad de Ciencias Aplicadas y Ambientales. The dataset includes 211 taxa, from which 156 were identified to species. We reported 48 families and 137 genera. The most species rich and abundant families were Fabaceae and Rubiaceae and the most abundant species was Talisia stricta (Sapindaceae). We found differences in diversity between north and south zones of the study area.
The Magdalena river upper watershed region is an important tropical dry forest conservation area. Twenty nine species and 4 genera recorded in this study have not been reported in previous reviews of the region. Additionally, Oxandra espintana is reported in literature as critically endangered and Aspidosperma polyneuron is reported as endangered, but there are no studies about their conservation status in the region. Our results suggest the strong need to develop additional inventories of plants that contribute to the knowledge of the plant diversity of this ecosystem in the region and studies of their conservation status.
Plant diversity, secondary forests, tropical dry forest.
Tropical dry forests (TDF) correspond to a complex and fragile ecosystem. This complexity is due to evaporation exceeding precipitation and there being one or two periods of drought which may last between 4 and 6 months/year, resulting in the defoliation of part of the vegetation by water stress (
TDF is one of the most threatened ecosystems by human activity around the world (
Recently, research has paid more attention to TDF. However, studies on its structure and diversity are not evenly distributed in the Neotropics. Most of the studies have been concentrated in a few countries such as Mexico (e.g.
Colombia is one of those countries where TDF is the most threatened and least studied. Only 8% of TDF original distribution in the country remains (
Diversity and ecosystem services of Tropical dry forest of the upper Magdalena river basin, Colombia.
Romero-Duque, Luz Piedad. Universidad de Ciencias Aplicadas y Ambientales. Bogotá. Colombia.
Balvanera Levy, Patricia. Instituto de Investigación en Ecosistemas y Sostenibilidad. UNAM. Morelia. México.
Jaramillo Luque, Víctor J. Instituto de Investigación en Ecosistemas y Sostenibilidad. UNAM. Morelia. México.
To determine the study area, we follow the
Description of the sampled sites in the Magdalena river upper watershed (Colombia).
Zone | Department | Site | Latitude | Longitude | Elevation (m asl) | Total rainfal (mm) | Mean temperature (ºC) |
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North | Tolima | 1 |
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300 | 1388 | 27 |
North | Tolima | 2 |
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463 | 1811 | 25 |
North | Cundinamarca | 3 |
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264 | 1431 | 28 |
North | Cundinamarca | 4 |
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395 | 1161 | 27 |
North | Cundinamarca | 5 |
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289 | 1345 | 27 |
North | Cundinamarca | 6 |
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301 | 1345 | 27 |
Sur | Huila | 7 |
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713 | 730 | 26 |
Sur | Huila | 8 |
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417 | 1314 | 27 |
Sur | Huila | 9 |
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374 | 1314 | 27 |
Sur | Huila | 10 |
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549 | 1314 | 28 |
Sur | Huila | 11 |
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413 | 1314 | 27 |
Sur | Huila | 12 |
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507 | 1216 | 28 |
Ecopetrol and Universidad de Ciencias Aplicadas y Ambientales.
We selected twelve TDF patches according to their size, accessibility and owner's permission. Half of the patches were in Tolima and Cundinamarca departments (north zone of the study area) and the other half was in Huila department (south zone of the study area). In each site, we established ten 50 m x 2 m transects (0.1 ha), at least 7.5 m apart from each other at each site.
All the materials were processed following the standardised procedures for herbaria described by
According to the criteria of
Enpoints: 74°50'35"W; 5°18’40"N - 74°34'5"W, 3°53'10"N and 74°43'48"W, 3°17'31"N - 75°56'13"W, 2°2'60"N.
The dataset contains a total of 655 tagged individuals. We found 211 taxa (48 families and 137 genera), from which 156 were identified to species (see data resource). Some individuals of 44 genera remained unidentified. This is mainly related to the lack of appropriate material (e.g. flowers) to provide a definite determination. Three species of Cactaceae family were included in the database.
For the total study area, Fabaceae and Rubiaceae were the most species rich and the most abundant (individuals sampled) families (Table
a. Five families with the most species richness and number of individuals and b. Five most abundant species in tropical dry forest of the Magdalena river upper watershed (Colombia).
Family | No. species | Family | No. Individuals | Species | No. Individuals |
Fabaceae | 30 | Fabaceae | 108 | Talisia stricta Triana & Planch. ex Radlk. | 35 |
Rubiaceae | 19 | Rubiaceae | 58 | Casearia corymbosa Kunth | 22 |
Euphorbiaceae | 12 | Sapindaceae | 47 | Astronium graveolens Jacq. - Cordia alliodora (Ruiz & Pav.) Oken | 20 |
Bignoniaceae | 10 | Salicaceae | 39 | Guatteria Ruiz & Pav. | 15 |
Annonaceae | 8 | Apocynaceae | 27 | Swartzia trianae Benth. | 1 |
Total number of families, genera and species of tropical dry forest in north and south zones of Magdalena river upper watershed (Colombia).
Family | Genera | Species | Individuals | |
North zone | 43 | 120 | 177 | 533 |
South zone | 26 | 47 | 65 | 122 |
Total | 48 | 137 | 211 | 655 |
The frequency distribution of the number of species amongst study sites was very skewed (Fig.
Species distribution amongst the twelve tropical dry forest patches in the Magdalena river upper watershed (Colombia).
Species | Study site | |||||||||||
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | |
Acacia farnesiana (L.) Willd. | X | |||||||||||
Acacia polyphylla DC. | X | |||||||||||
Acacia tortuosa (L.) Willd. | X | |||||||||||
Acalypha diversifolia Jacq. | X | |||||||||||
Acanthocereus tetragonus (L.) Hummelinck | X | |||||||||||
Achatocarpus nigricans Triana | X | X | X | |||||||||
Adenocalymma patulum (Miers) L.G.Lohmann | X | |||||||||||
Albizia guachapele (Kunth) Dugand | X | |||||||||||
Ampelocera Klotzsch | X | |||||||||||
Amyris pinnata Kunth | X | X | ||||||||||
Amyris sylvatica Jacq. | X | X | ||||||||||
Anacardiaceae | X | |||||||||||
Anacardium excelsum (Kunth) Skeels | X | |||||||||||
Annona edulis (Triana & Planch.) H.Rainer | X | |||||||||||
Annona L. | X | |||||||||||
Apeiba glabra Aubl. | X | |||||||||||
Aphelandra glabrata Willd. ex Nees | X | X | ||||||||||
Apocynaceae | X | |||||||||||
Ardisia foetida Willd. ex Roem & Schult. | X | |||||||||||
Ardisia Sw. | X | |||||||||||
Aspidosperma cuspa S.F.Blake ex Pittier | X | X | X | |||||||||
Aspidosperma desmanthum Benth. ex Müll.Arg. | X | |||||||||||
Aspidosperma polyneuron Müll.Arg. | X | X | X | |||||||||
Astronium graveolens Jacq. | X | X | X | X | X | X | ||||||
Astronium Jacq. | X | |||||||||||
Bactris major Jacq. | X | |||||||||||
Bactris pilosa Karst. | X | |||||||||||
Banisteriopsis C.B.Rob. ex Small | X | |||||||||||
Bauhinia guianensis Aubl. | X | |||||||||||
Bauhinia L. | X | |||||||||||
Beilschmiedia sulcata (Ruiz & Pav.) Kosterm. | X | |||||||||||
Bignoniaceae | X | |||||||||||
Brownea ariza Benth. | X | X | X | |||||||||
Bunchosia pseudonitida Cuatrec. | X | X | X | X | ||||||||
Bunchosia Rich. ex Juss. | X | |||||||||||
Bursera Jacq. ex L. | X | |||||||||||
Bursera simaruba Sarg. | X | X | X | |||||||||
Bursera tomentosa Triana & Planch. | X | X | ||||||||||
Byttneria aculeata Jacq. | X | |||||||||||
Calliandra magdalenae Benth. | X | |||||||||||
Calliandra riparia Pittier | X | |||||||||||
Capparidastrum frondosum (Jacq.) Cornejo & Iltis | X | X | X | |||||||||
Capparis L. | X | |||||||||||
Casearia corymbosa Kunth | X | X | X | X | X | N | ||||||
Casearia Jacq. | X | X | X | |||||||||
Casearia sylvestris Sw. | X | X | ||||||||||
Casearia tremula (Griseb.) Griseb. ex C.Wright | X | |||||||||||
Celtis trinervia Lam. | X | X | ||||||||||
Cereus hexagonus Mill. | X | |||||||||||
Cestrum L. | X | |||||||||||
Cestrum mutisii Willd. ex Roem. & Schult. | X | |||||||||||
Chiococca alba Hitchc. | X | |||||||||||
Chloroleucon mangense Britton & Rose | X | X | ||||||||||
Chomelia spinosa Jacq. | X | |||||||||||
Chrysochlamys Poepp. & Endl. | X | |||||||||||
Cinchona L. | X | X | X | |||||||||
Cinnamomum triplinerve (Ruiz & Pav.) Kosterm. | X | |||||||||||
Citharexylum sulcatum Moldenke | X | X | ||||||||||
Clusia schomburgkiana Benth. ex Engl. | X | |||||||||||
Coccoloba obovata Kunth | X | |||||||||||
Colubrina Rich. ex Brongn. | X | |||||||||||
Cordia alliodora (Ruiz & Pav.) Oken | X | X | ||||||||||
Cordia bifurcata Roem. & Schult. | X | |||||||||||
Cordia dentata J.L.M.Poiret | X | |||||||||||
Cordia L. | X | |||||||||||
Cordia macrocephala (Desv.) Kunth | X | |||||||||||
Coutarea hexandra (Jacq.) K.Schum. | X | |||||||||||
Croton argyrophyllus Kunth | X | |||||||||||
Croton caracasanus Pittier | X | |||||||||||
Croton ferrugineus Kunth | X | X | ||||||||||
Croton fragrans Kunth | X | X | ||||||||||
Croton glabellus L. | X | X | ||||||||||
Croton L. | X | X | X | |||||||||
Croton leptostachyus Kunth | X | |||||||||||
Croton schiedeanus Schltdl. | X | |||||||||||
Cupania L. | X | |||||||||||
Cupania latifolia Kunth | X | X | ||||||||||
Cupania papillosa Radlk. | X | |||||||||||
Cynophalla flexuosa J.Presl | X | X | X | |||||||||
Erythrina L. | X | |||||||||||
Erythroxylum cassinoides Planch. & Linden | X | |||||||||||
Erythroxylum hondense Kunth | X | |||||||||||
Erythroxylum macrophyllum Cav. | X | X | X | |||||||||
Erythroxylum ulei O.E.Schulz | X | |||||||||||
Esenbeckia Kunth | X | |||||||||||
Eugenia Mich. ex L. | X | X | X | |||||||||
Eugenia procera Poir. | X | x | ||||||||||
Fabaceae | X | |||||||||||
Faramea capillipes Müll.Arg. | X | |||||||||||
Forsteronia G.Mey. | X | |||||||||||
Garcinia madruno (Kunth) Hammel | X | |||||||||||
Genipa americana L. | X | |||||||||||
Guapira costaricana (Standl.) Woodson | X | X | X | |||||||||
Guapira pubescens (Kunth) Lundell | X | |||||||||||
Guatteria hirsuta Ruiz & Pav | X | |||||||||||
Guatteria Ruiz & Pav. | X | X | X | |||||||||
Guazuma ulmifolia Lam. | X | X | X | X | X | |||||||
Guettarda malacophylla Standl. | X | X | X | |||||||||
Gustavia santanderiensis R.Knuth | X | X | X | |||||||||
Gustavia verticillata Miers | X | X | ||||||||||
Handroanthus chrysanthus (Jacq.) S.O.Grose | X | |||||||||||
Helianthostylis sprucei Baill. | X | |||||||||||
Helicostylis Trécul | X | |||||||||||
Helicteres baruensis Jacq. | X | X | X | |||||||||
Herrania laciniifolia Goudot | X | |||||||||||
Hiraea Jacq. | X | X | ||||||||||
Hirtella americana L. | X | |||||||||||
Inga densiflora Benth. | X | |||||||||||
Jacaranda caucana Pittier | X | |||||||||||
Jatropha gossypiifolia L. | X | |||||||||||
Laetia americana L. | X | |||||||||||
Lunania parviflora Spruce ex Benth. | X | |||||||||||
Machaerium capote Triana ex Dugand | X | X | X | X | ||||||||
Machaerium goudotii Benth. | X | X | ||||||||||
Machaerium microphyllum Standl. | X | |||||||||||
Machaerium Pers. | X | X | X | |||||||||
Machaonia acuminata Humb. & Bonpl. | X | |||||||||||
Maclura tinctoria (L.) D.Don ex Steud. | X | X | ||||||||||
Magnoliophyta | X | X | X | |||||||||
Malpighia glabra L. | X | X | ||||||||||
Malpighia L. | X | |||||||||||
Malpighiaceae | X | X | ||||||||||
Malvaceae | X | X | ||||||||||
Manihot carthagenensis (Jacq.) Müll.Arg. | X | |||||||||||
Maripa Aubl. | X | |||||||||||
Marsdenia xerohylica Dugand | X | |||||||||||
Matayba Aubl. | X | X | ||||||||||
Memora patula Miers | X | X | ||||||||||
Miconia spicellata Bonpl. ex Naudin | X | |||||||||||
Monilicarpa tenuisiliqua (Jacq.) Cornejo & Iltis | X | |||||||||||
Morisonia americana L. | X | |||||||||||
Mouriri colombiana Morley | X | |||||||||||
Mussatia Bureau ex Baill. | X | |||||||||||
Myrcia DC. | X | X | X | X | ||||||||
Neea divaricata Poepp. & Endl. | X | X | ||||||||||
Neea Ruiz & Pav. | X | |||||||||||
Ocotea veraguensis (Meisn.) Mez | X | |||||||||||
Onoseris purpurea | X | |||||||||||
Ouratea Aubl. | X | |||||||||||
Oxandra espintana (Spruce ex Benth.) Baill. | X | |||||||||||
Oxandra venezuelana R.E.Fr. | X | |||||||||||
Paullinia densiflora Sm. | X | |||||||||||
Paullinia nitida Kunth | X | |||||||||||
Petrea rugosa Kunth | X | X | ||||||||||
Picramnia sphaerocarpa Planch. | X | |||||||||||
Piper marginatum Jacq. | X | |||||||||||
Piptocoma discolor (Kunth) Pruski | X | |||||||||||
Pisonia aculeata L. | X | |||||||||||
Pithecellobium dulce Benth. | X | X | X | X | ||||||||
Pithecellobium lanceolatum Benth. | X | |||||||||||
Platymiscium hebestachyum Benth. | X | X | X | X | ||||||||
Platymiscium pinnatum (Jacq.) Dugand | X | X | ||||||||||
Pleonotoma variabilis Miers | X | |||||||||||
Posoqueria latifolia Roem. & Schult. | X | |||||||||||
Pouteria Aubl. & Eyma | X | X | X | |||||||||
Pradosia colombiana (Standl.) T.D.Penn. ex T.J.Ayers & Boufford | X | |||||||||||
Preslianthus detonsus (Triana & Planch.) Iltis & Cornejo | X | X | X | |||||||||
Prosopis juliflora DC. | X | X | ||||||||||
Protium Burm.f. | X | |||||||||||
Protium sagotianum Marchand | X | |||||||||||
Pseudobombax septenatum (Jacq.) Dugand | X | X | X | |||||||||
Pseudolmedia laevis (Ruiz & Pav.) J.F.Macbr. | X | |||||||||||
Psidium guineense Sw. | X | X | ||||||||||
Psychotria carthagenensis Jacq. | X | |||||||||||
Psychotria micrantha Kunth | X | |||||||||||
Quadrella odoratissima (Jacq.) Hutch. | X | X | ||||||||||
Raimondia Saff. | X | |||||||||||
Randia aculeata L. | X | X | X | X | X | |||||||
Randia armata DC. | X | X | X | X | X | |||||||
Randia calycina Cham. | X | X | X | |||||||||
Randia L. | X | X | ||||||||||
Rollinia A.St.-Hil. | X | |||||||||||
Rondeletia pubescens Kunth | X | X | X | |||||||||
Rubiaceae | X | |||||||||||
Ruprechtia ramiflora C.A.Mey. | X | |||||||||||
Sapium glandulosum (L.) Morong | X | |||||||||||
Schaefferia frutescens Jacq. | X | |||||||||||
Schnella Raddi | X | |||||||||||
Securidaca L. | X | |||||||||||
Senegalia Raf. | X | X | X | |||||||||
Senegalia riparia (Kunth) Britton & Rose | X | |||||||||||
Sideroxylon celastrinum (Kunth) T.D.Penn. | X | |||||||||||
Simira cordifolia (Hook.f.) Steyerm. | X | |||||||||||
Simira rubescens (Benth.) Bremek. ex Steyerm. | X | |||||||||||
Solanum arboreum Humb. & Bonpl. ex Dunal | X | X | ||||||||||
Solanum L. | X | X | ||||||||||
Sorocea A.St.-Hil. | X | |||||||||||
Spondias radlkoferi Donn.Sm. | X | |||||||||||
Stemmadenia grandiflora (Jacq.) Miers | X | |||||||||||
Stenocereus griseus (Haw.) Buxb. | X | |||||||||||
Swartzia Schreb. | X | X | X | |||||||||
Swartzia simplex Spreng. | X | |||||||||||
Swartzia trianae Benth. | X | X | ||||||||||
Tabebuia chrysantha (Jacq.) Nicholson | X | |||||||||||
Tabebuia Gomes ex DC. | X | |||||||||||
Tabebuia ochracea (Cham.) Standley | X | X | X | |||||||||
Talisia stricta Triana & Planch. ex Radlk. | X | X | X | |||||||||
Trichilia acuminata C.DC. | X | X | ||||||||||
Trichilia elegans A.Juss. | X | |||||||||||
Trichilia oligofoliolata M.E.Morales-Puentes | X | X | ||||||||||
Trichilia pallida Sw. | X | X | X | X | ||||||||
Triplaris americana L. | X | X | X | X | ||||||||
Triumfetta acuminata Kunth | X | |||||||||||
Trophis P.Browne | X | |||||||||||
Valeriana L. | X | |||||||||||
Zanthoxylum fagara Sargent | X | X | X | X | ||||||||
Zanthoxylum L. | X | X | X | X | X | |||||||
Zanthoxylum quinduense Tul. | X | |||||||||||
Zanthoxylum rigidum Humb. & Bonpl. ex Willd. | X | X | X | X | ||||||||
Zygia inaequalis Pittier | X | |||||||||||
Total general | 34 | 64 | 21 | 78 | 47 | 36 | 23 | 10 | 7 | 18 | 5 | 11 |
The ten species with the highest importance value index in north and south zones of the tropical dry forest of Magdalena river upper watershed (Colombia).
Species | North | Species | South |
Randia armata DC. | 0.74 | Guettarda malacophylla Standl. | 1.01 |
Machaerium capote Triana ex Dugand | 0.73 | Aspidosperma cuspa S.F.Blake ex Pittier | 0.74 |
Bunchosia pseudonitida Cuatrec. | 0.72 | Casearia corymbosa Kunth | 0.74 |
Astronium graveolens Jacq. | 0.66 | Helicteres baruensis Jacq | 0.72 |
Casearia corymbosa Kunth | 0.63 | Zanthoxylum L. | 0.72 |
Talisia stricta Triana & Planch. ex Radlk. | 0.57 | Guapira costaricana (Standl.) Woodson | 0.69 |
Platymiscium hebestachyum Benth. | 0.57 | Banisteriopsis C.B.Rob. ex Small | 0.38 |
Pouteria Aubl. & Eyma | 0.56 | Coutarea hexandra (Jacq.) K.Schum. | 038 |
Casearia Jacq. | 0.56 | Forsteronia G.Mey. | 0.38 |
Myrcia DC. | 0.56 | Malpighia L. | 0.38 |
Sep 2014 – End 2015
Column label | Column description |
---|---|
basisOfRecord | Specific nature of data record |
catalogNumber | Identifier for the record within dataset |
class | Scientific name of the class in which the taxon is classified |
collectionCode | Name identifying the dataset from which the record was derived |
collectionID | Identifier for the dataset from which the record was derived |
continent | Name of the continent in which location occurs |
country | Name of the country in which location occurs |
countryCode | Standard code for the country in which location occurs |
county | Name of the next smaller administrative region than country in which location occurs |
dateIdentified | Date on which the subject was identified |
decimalLatitude | Geographic latitude where occurrence was recorded |
decimalLongitude | Geographic longitude where occurrence was recorded |
eventDate | Date-time when the occurrence was recorded |
family | Scientific name of the family in which the taxon is classified |
genus | Scientific name of the genus in which the taxon is classified |
geodeticDatum | Ellipsoid, geodetic datum or SRS, upon which the geographic coordinates are based |
georeferencedBy | List of people's names who determined the georeference for the location |
habitat | Habitat type where occurrence was registered |
identificationQualifier | Brief phrase to express the determiner's doubts about the identification |
identifiedBy | List of people's names who assigned the taxon to the subject |
institutionCode | Name in use by the institution having custody of the object(s) referred to in the record |
institutionID | Identifier for the institution having custody of the object(s) referred to in the record |
kingdom | Scientific name of the kingdom in which the taxon is classified |
language | Language of the resource |
licence | Legal document giving official permission to do something with the resource |
locality | Specific description of the place |
locationID | Identifier for the set of location information |
maximumElevationInMetres | Upper limit of the range of elevation |
minimumElevationInMetres | Lower limit of the range of elevation |
municipality | Name of the next smaller administrative region than county in which the location occurs |
occurrenceID | Identifier for the occurrence |
order | Scientific name of the order in which the taxon is classified |
phylum | Scientific name of the phylum in which the taxon is classified |
previousIdentifications | List of previous assignments of names to the organism |
recordedBy | List of people's names responsible for recording the original occurrence |
sampleSizeUnit | Unit of measurement of the sample size |
sampleSizeValue | Measurement of sample size |
samplingEffort | Amount of effort expended |
samplingProtocol | Description of the method used |
scientificName | Name of lowest level taxonomic rank that was determined |
scientificNameAuthorship | Authorship information for the scientificName |
specificEpithet | Name of the species epithet |
stateProvince | Name of the next smaller administrative region than country in which the location occurs |
taxonomicStatus | Status of the use of the scientificName as a label for a taxon linked to http://www.tropicos.org |
taxonRank | Taxonomic rank of the most specific name in the scientificName |
type | Kind of description |
verbatimCoordinates | The verbatim original spatial coordinates of the Location |
verbatimCoordinateSystem | The spatial coordinate system for the verbatimLatitude and verbatimLongitude or the verbatimCoordinates of the Location |
verbatimElevation | The original description of the elevation of the Location |
verbatimLocality | The original textual description of the place |
verbatimSRS | The ellipsoid, geodetic datum or SRS upon which coordinates given in verbatimCoordinates are based |
verbatimTaxonRank | Taxonomic rank of the most specific name in the scientificName as it appears in the original record |
vernacularName | A common or vernacular name |
This Study was funded by Univerisidad de Ciencias Aplicadas y Ambientales and Ecopetrol (Contract number 5212091).
JR-T, MF, AS-G and PC collected, analyed and curated the material. R-D, LP wrote the paper.