Biodiversity Data Journal :
Taxonomic paper
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Corresponding author:
Academic editor: Jose Fernandez-Triana
Received: 15 Apr 2015 | Accepted: 13 May 2015 | Published: 18 May 2015
© 2015 Daniela Gutiérrez-Arellano, Claudia Gutiérrez-Arellano, Alejandro Zaldívar-Riverón
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Gutiérrez-Arellano D, Gutiérrez-Arellano C, Zaldívar-Riverón A (2015) DNA Barcoding of the parasitoid wasp subfamily Doryctinae (Hymenoptera: Braconidae) from Chamela, Mexico. Biodiversity Data Journal 3: e5109. https://doi.org/10.3897/BDJ.3.e5109
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Background and aims. The Doryctinae is a considerably diverse, poorly studied group of parasitoid wasps and one of the most diverse subfamilies within Braconidae. Taxonomic knowledge of this group remains highly incomplete, specially in the tropics. In Mexico, it has been reported as the subfamily with the highest number of recorded genera. A preliminary Barcoding study carried out in the Chamela region, located near the Mexican pacific coast in Jalisco, identified 185 barcoding species of Dorytinae assigned to 19 identified doryctine genera. This work updates the later study, representing a three years effort to assess the species richness of this subfamily for the Chamela region.
Materials and methods. Ten collecting field trips of 5 to 10 days each were carried out from June 2009 to May 2011. A 2% divergence criterion using the BIN system implemented in BOLD was followed in order to establish species boundaries among the specimens that were collected.
Results and conclusions. A total of 961 specimens were collected, from which 883 COI sequences were obtained. The sequences generated corresponded to 289 barcoding species and 30 identified genera. The most speciose genera were Heterospilus Haliday (170 spp.), Ecphylus Förster (19 spp.), Allorhogas Gahan (15 spp.) and Callihormius Ashmead (14 spp.). Addition of previously collected material increased the diversity of the subfamily in the region to 34 genera and 290 species. Paraphyly of Heterospilus with respect to Neoheterospilus and Heterospathius was again recovered. Twenty new species and two new genera (Sabinita Belokobylskij, Zaldívar-Riverón et Martínez, Ficobolus Martínez, Belokobylskij et Zaldívar-Riverón) have been described so far from the material collected in this work.
Ichneumonoidea, species richness, Neotropics, faunistic study, COI
Biodiversity inventories represent an integral component for the adequate management of natural resources of any country. In the case of faunistic studies, however, these rarely include arthropod taxa due to their considerably high diversity and scarce taxonomic knowledge. In this context, DNA Barcoding (
With over 1,300 described and almost 3,000 estimated species, Doryctinae is one the four most diverse subfamilies of braconid parasitoid wasps together with the Braconinae, Microgastrinae and Opiinae (
The taxonomic knowledge of the Doryctinae is still far from complete, especially in the tropics and subtropics, where most of its species richness is known to occur (
Here we show the final list of the DNA Barcoding species inventory of the Doryctinae from the CBS, which was carried out during three years of collecting effort. We updated the list of genera that occur in the region and show their number of DNA Barcoding species based on the barcoding index criterion (BIN;
Specimens belonging to the subfamily Doryctinae were collected in the Chamela biological station (Fig.
A total of 10 collecting trips of 5 to 10 days each were carried out from June 2009 to May 2011. Collects were performed both during the rainy and dry seasons in order to have a complete representation of the examined group through the year. Specimens were collected in 24 sites within the CBS boundaries (Table
SITE | LATITUDE | LONGITUDE | ALTITUDE | TRAP TYPE |
Near CBS | 19.4985 | -105.0441 | 92 | Yellow pan trap |
Camino Zarco/Chachalaca | 19.4956 | -105.0393 | 30 | Sweep net |
Camino Búho | 19.4990 | -105.0412 | 74 | Malaise |
19.4988 | -105.0404 | 65 | Light trap | |
Camino Chachalaca | 19.4993 | -105.0383 | 56 | Sweep net, Malise trap, Yellow pan trap |
19.4978 | -105.0445 | 120 | Sweep net | |
Camino Calandria | 19.5084 | -105.0378 | 120 | Yellow pan trap, sweep net, light trap, Malaise trap |
Eje central/Camino Calandria | 19.5002 | -105.0425 | 49 | Yellow pan |
19.5039 | -105.0335 | 52 | Sweep net | |
Camino Calandria/Camino Chachalaca | 19.5049 | -105.0377 | 52 | Sweep net |
Fundación-Cuixmala/Poza del Jaguar | 19.4292 | -104.9796 | 66 | Sweep net |
Fundación-Cuixmala/El Sendero | 19.4192 | -104.9732 | 61 | Sweep net, Malaise trap |
Behind CBS dinning room | 19.4978 | -105.0445 | 120 | Sweep net |
Camino Ardilla | 19.5042 | -105.0379 | 39 | Sweep net |
Eje central | 19.5085 | -105.0366 | 32 | Sweep net |
Calandria(Arroyo Calandria) | 19.5036 | -105.0364 | 62 | Sweep net |
19.5002 | -105.0353 | 109 | Sweep net | |
Camino Búho/ Chachalaca | 19.4991 | -105.0421 | 68 | "O" Trap |
19.4978 | -105.0444 | 106 | Sweep net | |
Camino Antiguo | 19.5047 | -105.0367 | 59 | Sweep net |
DNA samples were obtained from a single hind leg and sent for DNA extraction and amplification to the Canadian Center for DNA Barcoding at University of Guelph, Ontario (see detailed laboratory protocols in
Species boundaries were established following a 2% divergence criterion (
ASDOR Project link
Search as: ASDOR
http://www.boldsystems.org/index.php/Public_BINSearch?searchtype=records
GenBank link
Search as: Nucleotide + accession number
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A total of 961 specimens were collected during the ten field trips, of which 883 COI sequences were generated. Fifteen of these sequences had a length lower than 500 bp and thus did not receive a BIN, though they were included in the analysis. The sequences generated belonged to 289 barcoding species and 30 identified genera, though four barcoding species could not be assigned to any genus (Table
Doryctine genera and number of barcoding species identified in this study (Total 289).
* Species identified only based on morphological evidence.
Genera | Barcoding species |
Allorhogas Gahan | 15 |
Caenophanes Förster | 1 |
Callihormius Ashmead | 14 |
Coiba Marsh | 7 |
Concurtisella Roman | 1 |
Curtisella Spinola | 4 |
Doryctinus* Roman | 1 |
Ecphylus Förster | 19 |
Ficobolus Martínez, Belokobylskij et Zaldívar-Riverón | 1 |
Glyptocolastes Ashmead | 8 |
Heerz Marsh | 2 |
Heterospathius Barbalho et Penteado-Dias | 1 |
Heterospilus Haliday | 170 |
Iare Barbalho et Penteado-Dias | 6 |
Janzenia Marsh | 1 |
Leluthia Cameron | 1 |
Lissopsius Marsh | 2 |
Masonius Marsh | 2 |
Monarea* Szépligeti | 1 |
Neoheterospilus Belokobylskij | 3 |
Nervellius Roman | 1 |
Notiospathius Matthews et Marsh | 5 |
Odontobracon Cameron | 2 |
Ondigus Braet, Barbalhoa et Van Achterberg | 2 |
Panama Marsh | 1 |
Psenobolus Reinhard | 2 |
Ptesimogaster Marsh | 1 |
Rhaconotus Ruthe | 3 |
Sabinita Belokobylskij, Zaldívar-Riverón et Martínez | 1 |
Spathius Nees | 1 |
Stenocorse Marsh | 3 |
Vanderentiellus Marsh | 2 |
Whitfieldiellus Marsh | 1 |
Unidentifed | 4 |
The reconstructed NJ tree recovered the megadiverse genus Heterospilus as non-monophyletic with respect to Heterospathius and Neotherospilus (Fig.
Neighbour-joining tree obtained from BOLD that includes 883 nucleotide sequences belonging to doryctine specimens. The distance model used was the Kimura 2 Parameter, the marker was COI-5P, and the 1st, 2nd and 3rd codon positions were included. The sequences had a lengrh greater than 200bp. See Suppl. material
Twenty new species and two new genera (Sabinita Belokobylskij, Zaldívar-Riverón et Martínez, Ficobolus Martínez, Belokobylskij et Zaldívar-Riverón) have been described by AZR and collaborators from the doryctine specimens collected for this study (Table
List of the new species described from specimens collected in this study
SPECIES | REFERENCE |
Allorhogas coccolobae Martínez and Zaldívar-Riverón |
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Allorhogas crassifemur Martínez and Zaldívar-Riverón |
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Allorhogas jaliscoensis Martínez and Zaldívar-Riverón |
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Allorhogas marshi Martínez and Zaldívar-Riverón |
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Allorhogas parvus Martínez and Zaldívar-Riverón |
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Allorhogas scotti Martínez and Zaldívar-Riverón |
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Ficobolus jaliscoi Zaldívar-Riverón and Belokobylskij |
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Heerz ecmahla Martínez, Zaldívar-Riverón, Ceccarelli and Shaw |
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Heerz macrophthalma Martínez, Zaldívar-Riverón, Ceccarelli and Shaw |
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Iare cheguevarai Martínez, Zaldívar-Riverón and Ceccarelli |
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Iare mexicanus Martínez, Zaldívar-Riverón and Ceccarelli |
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Lissopsius jaliscoensis Zaldívar-Riverón, Martínez, Ceccarelli et Shaw |
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Lissopsius pacificus Zaldívar-Riverón, Martínez, Ceccarelli et Shaw |
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Monarea fridae Belokobylskij, Zaldivar-Riveron et Coronado-Blanco |
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Neoheterospilus chamelae Martínez et Zaldívar-Riverón |
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Notiospathius crypticus Reséndiz-Flores, Nunes and Zaldívar-Riverón |
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Notiospathius mariachi Reséndiz-Flores, Nunes and Zaldívar-Riverón |
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Ondigus cuixmalensis Zaldívar-Riverón, Martínez, Ceccarelli and Shaw |
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Sabinita mexicana Belokobylskij, Zaldívar-Riverón and Martínez |
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Spathius chamelae Belokobylskij and Zaldívar-Riverón |
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The Mexican dry tropical forest is known for containing a considerably high species richness and endemicity rates for various plant and animal groups (
Our updated study identified 14 additional genera and increased 53% the number of barcoding species found in the CBS with respect to the results obtained in
A vast species richness found for the subfamily Doryctinae was reported for Costa Rica (458 spp.;
Similar to our preliminary study, paraphyly of Heterospilus with respect to Heterospathius and Neoheterospilus was again recovered. A non-monophyletic Heterospilus was also recovered in a recent multi locus phylogenetic study (
Phylogenetic affinities of Monarea Szépligeti, 1904 (Hymenoptera: Braconidae, Doryctinae, with description of a new species from Mexico
Table containing the Process ID of specimens sampled and Barcode Index Number (BIN) used for the species accumulation curve.