Biodiversity Data Journal :
Data paper
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Corresponding author:
Academic editor: Lyubomir Penev
Received: 28 Apr 2015 | Accepted: 13 Jul 2015 | Published: 17 Jul 2015
© 2015 Rafael Araujo, Yde de Jong
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Araujo R, de Jong Y (2015) Fauna Europaea: Mollusca – Bivalvia. Biodiversity Data Journal 3: e5211. https://doi.org/10.3897/BDJ.3.e5211
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Fauna Europaea provides a public web-service with an index of scientific names (including important synonyms) of all living European land and freshwater animals, their geographical distribution at country level (up to the Urals, excluding the Caucasus region), and some additional information. The Fauna Europaea project covers about 230,000 taxonomic names, including 130,000 accepted species and 14,000 accepted subspecies, which is much more than the originally projected number of 100,000 species. This represents a huge effort by more than 400 contributing specialists throughout Europe and is a unique (standard) reference suitable for many users in science, government, industry, nature conservation and education. For the Mollusca-Bivalvia, data from 5 families (Margaritiferidae, Unionidae, Sphaeriidae, Cyrenidae, Dreissenidae) containing 55 species are included in this paper.
European freshwater bivalves belong to the Orders Unionoida and Cardiida. All the European unionoids are included in the superfamily Unionoidea, the freshwater mussels or naiads. The European cardiids belong to the following three superfamilies: Cardioidea, Cyrenoidea and Dreissenoidea. Among the Unionoidea there are the most imperilled animal groups on the planet while the Cardioidea includes the cosmopolitan genus Pisidium, the Cyrenoidea the Asiatic clam (Corbicula fluminea) and the Dreissenoidea the famous invasive zebra mussel (Dreissena polymorpha). Basic information is summarized on their taxonomy and biology. Tabulations include a complete list of the current estimated families, genera and species.
Biodiversity Informatics, Fauna Europaea, Taxonomic indexing, Zoology, Biodiversity, Taxonomy, Mollusca, Bivalvia, Margaritiferidae, Unionidae, Sphaeriidae, Cyrenidae, Dreissenidae, freshwater mussels, zebra mussel
The European Commission published the European Community Biodiversity Strategy, providing a framework for development of Community policies and instruments in order to comply with the Convention on Biological Diversity. This Strategy recognises the current incomplete state of knowledge at all levels concerning biodiversity, which is a constraint on the successful implementation of the Convention. Fauna Europaea contributes to this Strategy by supporting one of the main themes: to identify and catalogue the components of European biodiversity into a database in order to serve as a basic tool for science and conservation policies.
With regard to biodiversity in Europe, both science and policies depend on a knowledge of its components. The assessment of biodiversity, monitoring changes, sustainable exploitation of biodiversity, and much legislative work depend upon a validated overview of taxonomic biodiversity. Towards this end Fauna Europaea plays a major role, providing a web-based information infrastructure with an index of scientific names (including important synonyms) of all living European land and freshwater animals, their geographical distribution at country level and some additional useful information. In this sense, the Fauna Europaea database provides a unique reference for many user-groups such as scientists, governments, industries, conservation communities and educational programs.
Fauna Europaea started in 2000 as an EC-FP5 four-years project, delivering its first release in 2004 (
Within the EU BON project also further steps will be made to implement Fauna Europaea as a basic tool and standard reference for biodiversity research and to evaluate taxonomic expertise capacity in Europe. The Fauna Europaea data-papers will contribute to a quality assessement on biodiversity data by providing estimates on gaps in taxonomic information and knowledge.
The Fauna Europaea is a database of the scientific names and distribution of all living, currently known multicellular European land and fresh-water animal species assembled by a large network of experts, using advanced electronic tools for data collations and validation routines. An extended description of the Fauna Europaea project can be found in
The Mollusca-Bivalvia are one of the 58 Fauna Europaea major taxonomic groups, covering 55 species (Fig.
(Introduction Mollusca-Bivalvia
Bivalves (8,000 species) are the second richest mollusc class after the Gastropoda (60,000 species). Freshwater bivalves live in rivers and lakes around the world except Antarctica. They represent three subclasses, 19 families, 206 genera and about one thousand species (
Family Sphaeriidae
Pea clams (Sphaeriidae) are ubiquitous in freshwater ecosystems; they have a minimal size of 2 mm and a life span of one year. They are always hermaphrodite and incubate the fertilized eggs into their gills until the juvenile stage (
Family Cyrenidae
Often also named by its synomy Corbiculidae. In Europe only lives the genus Corbicula (). The number of species considered under this genus is not yet known, we recognize two hyper variable species, Corbicula fluminea (Müller, 1774) (Fig.
Family Dreissenidae
In Europe live two genera and two species, Dreissena polymprpha (Fig.
Recentrly Bilandzija (
Families Unionidae and Margaritiferidae
The assemblage fauna of European Unionoida includes only two familes, Margaritiferidae (Fig.
Freshwater mussels, also known as naiads, can grow to lengths of 25 cm and live more than a century. They are one of the most imperilled animal groups on the planet, yet they play an extremely important role in the ecology of freshwater ecosystems as a main component of the freshwater biomass (
In addition, one of the most amazing traits about freshwater mussels is their specialized reproductive strategy: the eggs are fertilized in the mussel gills (marsupium), where also occurs the segmentation until the glochidium, which has a temporary but obligatory parasitic stage in which the larvae (glochidia) attach to the external surface of a suitable host prior to metamorphosis to the free-living juvenile stage. The males release to the water the sperm, which will be siphoned for the females for fertilization (
The form of the Unionoida shell can vary according to the biotype, the environmental influences giving rise to changes through which the identification of a shell can be made more difficult.
This Biodiversity Data Journal (BDJ) data paper includes the taxonomic indexing efforts in the Fauna Europaea on European Mollusca-Bivalvia covering the first two versions of Fauna Europaea worked on between 2000 and 2013 (up to version 2.6).
The taxonomic framework of Fauna Europaea includes partner institutes, providing taxonomic expertise and information, and expert networks taking care about data collation.
Every taxonomic group is covered by at least one Group Coordinator responsible for the supervision and integrated input of taxonomic and distributional data of a particular group. The Fauna Europaea checklist would not have reached its current level of completion without the input from several groups of specialists. The formal responsibility of collating and delivering the data of relevant families rested with a number of Taxonomic Specialists (see Table
TAXONOMY | EUROPE | |||
FAMILY | SPECIALIST(S) | DATABASED SPECIES (Fauna Europaea) | TOTAL DESCRIBED SPECIES (information-gap) | TOTAL ESTIMATED SPECIES (knowledge-gap) |
Corbiculidae | Rafael Araujo | 2 | 2 | 2 |
Dreissenidae | Rafael Araujo | 5 | 7 | 7–10 |
Margaritiferidae | Rafael Araujo | 2 | 2 | 2 |
Sphaeriidae | Rafael Araujo | 30 | 34 | 35–40 |
Unionidae | Rafael Araujo | 16 | 19 | 19–25 |
Data management tasks are carried out by the Fauna Europaea project bureau. During the project phase (until 2004) a network of principal partners took responsability for various management tasks: Zoological Museum Amsterdam (general management & system development), Zoological Museum of Copenhagen (data collation), National Museum of Natural History in Paris (data validation) and Museum and Institute of Zoology in Warsaw (NAS extension). Once the formal end of the project ended (2004-2013) all tasks were were taken over by the Zoological Museum Amsterdam.
The area study covers the European mainland (Western Palearctic), including the Macaronesian islands, excluding the Caucasus, Turkey, Arabian Peninsula and Northern Africa (see: Geographic coverage).
Standards. Group coordinators and taxonomic specialists have to deliver the (sub)species names according to strict standards. The names provided by Fauna Europaea are scientific names. The taxonomic scope includes issues like, (1) the definition of criteria used to identify the accepted species-group taxa, (2) the hierarchy (classification scheme) for the accommodation of the all accepted species and (3), relevant synonyms, and (4) the correct nomenclature. The Fauna Europaea 'Guidelines for Group Coordinators and Taxonomic Specialists', include the standards, protocols, scope, and limits that provide the instructions for all more then 400 specialists contributing to the project, strictly following the provisions of the current edition of the International Code of Zoological Nomenclature.
Data management. The data records could either be entered offline into a preformatted MS-Excel worksheet or directly into the Fauna Europaea transaction database using an online browser interface. Since 2013 the data servers are hosted at the Museum für Naturkunde in Berlin (migrated from ZMA-UvA).
Data set. The Fauna Europaea basic data set consists of: accepted (sub)species names (including authorship), synonym names (including authorship), a taxonomic hierarchy/classification, misapplied names (including misspellings and alternative taxonomic views), homonym annotations, expert details, European distribution (at country level), Global distribution (only for European species), taxonomic reference (optional), occurrence reference (optional).
Fauna Europaea was funded by the European Commission under the Fifth Framework Programme and contributed to the Support for Research Infrastructures work programme with Thematic Priority Biodiversity (EVR1-1999-20001) for a period of four years (1 March 2000 - 1 March 2004), including a short 'NAS extension', allowing EU candidate accession countries to participate. Follow-up support was given by the EC-FP5 EuroCAT project (EVR1-CT-2002-20011), by the EC-FP6 ENBI project (EVK2-CT-2002-20020), by the EC-FP6 EDIT project (GCE 018340), by the EC-FP7 PESI project (RI-223806) and by the EC-FP7 ViBRANT project (RI-261532). Continuing management and hosting of the Fauna Europaea services was supported by the University of Amsterdam (Zoological Museum Amsterdam) and SARA/Vancis. Recently the hosting of Fauna Europaea was taken over by the Museum für Naturkunde in Berlin, supported by the EC-FP7 EU BON project (grant agreement №308454).
For preparing the Mollusca-Bivalvia data set additional support was received from the Fauna Ibérica Project (Museo Nacional de Ciencias Naturales-C.S.I.C).
See spatial coverage and geographic coverage descriptions.
Fauna Europaea data have been assembled by principal taxonomic experts, based on their individual expertise, including literature sources, collection research, and field observations. In total no less than 476 experts contributed taxonomic and/or faunistic information for Fauna Europaea. The vast majority of the experts are from Europe (including EU non-member states). As a unique feature, Fauna Europaea funds were set aside for rewarding/compensating for the work of taxonomic specialists and group coordinators.
To facilitate data transfer and data import, sophisticated on-line (web interfaces) and off-line (spreadsheets) data-entry routines were built, integrated within an underlying central Fauna Europaea transaction database (see Fig.
A first release of the Fauna Europaea index via the web-portal has been presented at 27th of September 2004, the most recent release (version 2.6.2) was launched at 29 August 2013. An overview of Fauna Europaea releases can be found here: http://www.faunaeur.org/about_fauna_versions.php.
Fauna Europaea data are unique in a sense that they are fully expert based. Selecting leading experts for all groups assured the systematic reliability and consistency of the Fauna Europaea data.
Furthermore, all Fauna Europaea data sets are intensively reviewed at regional and thematic validation meetings, at review sessions on taxonomic symposia (for some groups), by Fauna Europaea Focal Points (during the FaEu-NAS and PESI projects) and by various end-users sending annotations using the web form at the web-portal. Additional validation on gaps and correct spelling was effected at the validation office in Paris.
Checks on technical and logical correctness of the data have been implemented in the data entry tools, including around 50 "Taxonomic Integrity Rules". This validation tool proved to be of huge value for both the experts and project management, and contributed significantly to preparation of a remarkably clean and consistent data set. This thorough reviewing makes Fauna Europaea the most scrutinised data sets in its domain.
Estimated gaps for Mollusca-Bivalvia, in terms of described species that are known from Europe, but currently not included in the database are presented in Table
To optimise the use and implementation of a uniform and correct nomenclature, also following the global efforts on establishing a so-called 'Global Names Architecture' (
By evaluating team structure and life cycle procedures (data-entry, validation, updating, etc.), clear definitions of roles of users and user-groups, according to the taxonomic framework were established, including ownership and read and writes privileges, and their changes during the project life-cycle. In addition, guidelines on common data exchange formats and codes have been issued (see also the 'Guidelines for Experts' document).
Species and subspecies distributions in Fauna Europaea are registered at least a country level, i.e. for political countries. For this purpose the FaEu geographical system basically follows the TDWG standards. The covered area includes the European mainland (Western Palearctic), plus the Macaronesian islands (excl. Cape Verde Islands), Cyprus, Franz Josef Land and Novaya Zemlya. Western Kazakhstan and the Caucasus are excluded (see Fig.
The focus is on species (or subspecies) of European multicellular animals of terrestrial and freshwater environments. Species in brackish waters, occupying the marine/freshwater or marine/terrestrial transition zones, are generally excluded. Nevertheless, we have considered some bivalves which can survive in brackish waters, as Mytilopsis and Dreissena.
Mediterranean (N 35°) and Arctic Islands (N 82°) Latitude; Atlantic Ocean (Mid-Atlantic Ridge) (W 30°) and Ural (E 60°) Longitude.
The Fauna Europaea database contains the scientific names of all living European land and freshwater animal species, including numerous infra-groups and synonyms. More details about the conceptual background of Fauna Europaea and standards followed are described above and in the project description paper(s).
This data paper covers the Mollusca-Bivalvia content of Fauna Europaea, including 5 families, 55 species, 34 subspecies and 96 (sub)species synonyms (see Fig.
Although the classification used in FaunaEuropaea include the order Veneroida with the superfamilies Cardioidea, Corbiculoidea, Sphaerioidea and Dreissenoidea, now it has changed to the order Cardiida with 3 superfamilies: Cardioidea, Cyrenoidea and Dreissenoidea. Indeed, family Corbiculidae is now Cyrenidae (
Rank | Scientific Name |
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kingdom | Animalia |
subkingdom | Eumetazoa |
phylum | Mollusca |
class | Bivalvia |
subclass | Eulamellibranchia |
superorder | Heterodonta |
order | Veneroida |
superfamily | Cardioidea |
superfamily | Corbiculoidea |
family | Corbiculidae |
superfamily | Dreissenoidea |
family | Dreissenidae |
superfamily | Sphaerioidea |
family | Sphaeriidae |
superorder | Palaeoheterodonta |
order | Unionoida |
superfamily | Unionoidea |
family | Margaritiferidae |
family | Unionidae |
subfamily | Unioninae |
Currently living animals in stable populations, largely excluding (1) rare/irregular immigrants, intruder or invader species, (2) accidental or deliberate releases of exotic (pet) species, (3) domesticated animals, (4) foreign species imported and released for bio-control or (5) foreign species largely confined to hothouses.
Fauna Europaea data are licensed under CC BY SA version 4.0. The property rights of experts over their data is covered by their Fauna Europaea contract agreements. For more IPR details see: http://www.faunaeur.org/copyright.php.
Column label | Column description |
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datasetName | The name identifying the data set from which the record was derived (http://rs.tdwg.org/dwc/terms/datasetName). |
version | Release version of data set. |
versionIssued | Issue data of data set version. |
rights | Information about rights held in and over the resource (http://purl.org/dc/terms/rights). |
rightsHolder | A person or organization owning or managing rights over the resource (http://purl.org/dc/terms/rightsHolder). |
accessRights | Information about who can access the resource or an indication of its security status (http://purl.org/dc/terms/accessRights). |
taxonID | An identifier for the set of taxon information (http://rs.tdwg.org/dwc/terms/taxonID). |
parentNameUsageID | An identifier for the name usage of the direct parent taxon (in a classification) of the most specific element of the scientificName (http://rs.tdwg.org/dwc/terms/parentNameUsageID). |
scientificName | The full scientific name, with authorship and date information if known (http://rs.tdwg.org/dwc/terms/scientificName). |
acceptedNameUsage | The full name, with authorship and date information if known, of the currently valid (zoological) taxon (http://rs.tdwg.org/dwc/terms/acceptedNameUsage). |
originalNameUsage | The original combination (genus and species group names), as firstly established under the rules of the associated nomenclaturalCode (http://rs.tdwg.org/dwc/terms/originalNameUsage). |
family | The full scientific name of the family in which the taxon is classified (http://rs.tdwg.org/dwc/terms/family). |
familyNameId | An identifier for the family name. |
genus | The full scientific name of the genus in which the taxon is classified (http://rs.tdwg.org/dwc/terms/genus). |
subgenus | The full scientific name of the subgenus in which the taxon is classified. Values include the genus to avoid homonym confusion (http://rs.tdwg.org/dwc/terms/subgenus). |
specificEpithet | The name of the first or species epithet of the scientificName (http://rs.tdwg.org/dwc/terms/specificEpithet). |
infraspecificEpithet | The name of the lowest or terminal infraspecific epithet of the scientificName, excluding any rank designation (http://rs.tdwg.org/dwc/terms/infraspecificEpithet). |
taxonRank | The taxonomic rank of the most specific name in the scientificName (http://rs.tdwg.org/dwc/terms/infraspecificEpithet). |
scientificNameAuthorship | The authorship information for the scientificName formatted according to the conventions of the applicable nomenclaturalCode (http://rs.tdwg.org/dwc/terms/scientificNameAuthorship). |
authorName | Author name information |
namePublishedInYear | The four-digit year in which the scientificName was published (http://rs.tdwg.org/dwc/terms/namePublishedInYear). |
Brackets | Annotation if authorship should be put between parentheses. |
nomenclaturalCode | The nomenclatural code under which the scientificName is constructed (http://rs.tdwg.org/dwc/terms/nomenclaturalCode). |
taxonomicStatus | The status of the use of the scientificName as a label for a taxon (http://rs.tdwg.org/dwc/terms/taxonomicStatus). |
resourceDescription | An account of the resource, including a data-paper DOI (http://purl.org/dc/terms/description) |
Column label | Column description |
---|---|
datasetName | The name identifying the data set from which the record was derived (http://rs.tdwg.org/dwc/terms/datasetName). |
version | Release version of data set. |
versionIssued | Issue data of data set version. |
rights | Information about rights held in and over the resource (http://purl.org/dc/terms/rights). |
rightsHolder | A person or organization owning or managing rights over the resource (http://purl.org/dc/terms/rightsHolder). |
accessRights | Information about who can access the resource or an indication of its security status (http://purl.org/dc/terms/accessRights). |
taxonName | The full scientific name of the higher-level taxon |
scientificNameAuthorship | The authorship information for the scientificName formatted according to the conventions of the applicable nomenclaturalCode (http://rs.tdwg.org/dwc/terms/scientificNameAuthorship). |
taxonRank | The taxonomic rank of the most specific name in the scientificName (http://rs.tdwg.org/dwc/terms/infraspecificEpithet). |
taxonID | An identifier for the set of taxon information (http://rs.tdwg.org/dwc/terms/taxonID) |
parentNameUsageID | An identifier for the name usage of the direct parent taxon (in a classification) of the most specific element of the scientificName (http://rs.tdwg.org/dwc/terms/parentNameUsageID). |
resourceDescription | An account of the resource, including a data-paper DOI (http://purl.org/dc/terms/description) |
The mollusks bivalvia taxonomy in Fauna Europaea proceeds from the CLECOM efforts (
The authors thank María de los Ángeles Ramos, head of the Fauna Ibérica Project, for entrusting the work to update the taxonomy of the Spanish freshwater bivalves and for recommending the first author to the Fauna Europaea. In addition, the authors would like to express their gratitude towards the CLECOM working group (see 'Additional information') for their efforts on preparing a checklist of European terrestrial and freshwater) molluscs.