Biodiversity Data Journal :
Research Article
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Corresponding author:
Academic editor: Nicolas Bailly
Received: 01 Apr 2016 | Accepted: 01 Jun 2016 | Published: 01 Nov 2016
© 2016 Vasilis Gerovasileiou, Thanos Dailianis, Emmanouela Panteri, Nikitas Michalakis, Giulia Gatti, Maria Sini, Charalampos Dimitriadis, Yiannis Issaris, Maria Salomidi, Irene Filiopoulou, Alper Doğan, Laure Thierry de Ville d’Avray, Romain David, Melih Ertan Ҫinar, Drosos Koutsoubas, Jean-Pierre Féral, Christos Arvanitidis
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Gerovasileiou V, Dailianis T, Panteri E, Michalakis N, Gatti G, Sini M, Dimitriadis C, Issaris Y, Salomidi M, Filiopoulou I, Doğan A, Thierry de Ville d’Avray L, David R, Ҫinar M, Koutsoubas D, Féral J, Arvanitidis C (2016) CIGESMED for divers: Establishing a citizen science initiative for the mapping and monitoring of coralligenous assemblages in the Mediterranean Sea. Biodiversity Data Journal 4: e8692. https://doi.org/10.3897/BDJ.4.e8692
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Over the last decade, inventorying and monitoring of marine biodiversity has significantly benefited from the active engagement of volunteers. Although several Citizen Science projects concern tropical reef ecosystems worldwide, none of the existing initiatives has yet specifically focused on their Mediterranean equivalents. Mediterranean coralline reefs, known as “coralligenous”, are bioherms primarily built by calcifying rhodophytes on hard substrates under dim-light conditions; they are considered hotspots of biodiversity and are extremely popular among divers due to their complex structure, conspicuous biological wealth and high aesthetic value. Nevertheless, data on their distribution, structure and conservation status is lacking for several Mediterranean areas while they are vulnerable to an increasing number of threats.
In the framework of CIGESMED SeasEra (ERAnet) project a specialized Citizen Science project was launched, aiming to engage enthusiast divers in the study and monitoring of Mediterranean coralligenous assemblages through the gathering of basic information regarding their spatial occurrence, assemblage structure and associated pressures or threats. For its active implementation, a data collection protocol and a multilingual website were developed, comprising an educational module and a data submission platform. Georeferenced data reporting focuses on: (a) basic topographic and abiotic features for the preliminary description of each site, and the creation of data series for sites receiving multiple visits; (b) presence and relative abundance of typical conspicuous species, as well as (c) existence of pressures and imminent threats, for the characterization and assessment of coralligenous assemblages. A variety of tools is provided to facilitate end users, while divers have the choice to report additional information and are encouraged to upload their photographs. The long-term goal is the development of an active community of amateur observers providing widespread and ecologically significant data on coralligenous assemblages.
Coralligenous assemblages, Coralligenous outcrops, coralline reefs, bioherms, biodiversity hotspot, monitoring, citizen science, SCUBA diving, Mediterranean Sea
Active involvement of volunteers has greatly assisted inventorying and monitoring of marine biodiversity, over the last decade (
Mediterranean coralline reefs, widely known as "coralligenous" (from the french term "coralligène", sensu
The CIGESMED SeasEra project aims to enhance understanding on the links between natural and anthropogenic pressures and ecosystem functioning to define and maintain the “Good Environmental Status” (GES) of the Mediterranean Sea, through the integrated study of coralligenous assemblages. In the framework of CIGEDMED SeasEra project, a specialized CS initiative was launched aiming to engage enthusiast divers in the study of this Mediterranean habitat in order to obtain information regarding its spatial distribution, enable a primary characterization of the basic structure of its assemblages, and monitor potential pressures and threats to the habitat. The initial development of this pilot CS project was based on previous experience of the IMBBC (Institute of Marine Biology, Biotechnology and Aquaculture, HCMR) research group and CIGESMED partners on citizen science pilots design and implementation, as well as on the human, hardware and software resources of the LifeWatchGreece Research Infrastructure, a landmark in the European Strategy Forum on Research Infrastructures (ESFRI) roadmap. This paper aims to describe the background, basic principles and structure of the specialized CS initiative, along with the developed infrastructure, tools and guidelines that will support the ongoing collection of data on a Mediterranean scale.
Past experience from CS projects showed that it is relatively easy to design a CS approach and address volunteers but hard to ensure continuous production and flow of useful and reliable data (
A. Identification of new sites hosting coralligenous assemblages
This is particularly important given the considerable paucity of spatial information regarding the presence of coralligenous bioherms in the eastern and southern Mediterranean regions, and the high cost of conducting extensive surveys to gather relevant data, since this habitat type usually develops in relatively deep waters (i.e. average of 20 m or even deeper in the eastern Mediterranean).
B. Spatial recording of pressures and imminent threats
Such baseline information is key in the design of effective management plans for the conservation of coralligenous assemblages in different parts of the Mediterranean.
Citizen science approaches maximize their potential when appropriately designed and implemented to address specific scientific goals (
Coralligenous bioherms usually develop in circalittoral waters, with their upper distribution limit ranging from less than 20 m depth in the western Mediterranean regions to more than 30 m in the eastern basin, although exceptions can be found in both areas depending on the prevailing environmental conditions (
For the active implementation of the designed CS protocol, a portal supporting multilingual content was developed. It is currently available in 6 languages: English, French, Greek, Italian, Turkish, and Spanish. For the website development all available options were considered and Drupal® was selected as the platform that could optimally satisfy the demanding requirements of the designed website. Flexibility, stability and an API framework that can accommodate almost all conceivable functionality were the key characteristics for choosing the specific Framework - CMS (Content Management System). The website uses the Bootstrap 3.x, the most popular HTML, CSS and JS framework for development of complex dynamic websites and web applications, providing an easy way to adapt a responsive web design layout to the final template. All technologies involved in the development process are Open Source, based on the well-tested LAMP Platform (acronym for Linux, Apache, MySQL and PHP) and most used in WWW. For map display functionality Leaflet library and the Openlayers 3.x were used combined with the Google Maps API v.3.
An advanced user management system was developed, with three different groups of registered users: (a) divers, who can create, edit and delete content about observations, (b) country managers, being able to verify new user registrations, and (c) website administrators. Based on permissions set for those groups, each registered user has access to various features of the website. The demand of a complex observation registration form was covered by providing the user with the option to choose between different form displays when the user creates or edits an observation.
A mobile application, that was originally developed in the framework of the LifeWatchGreece infrastructure, was modified and extended to support the present CS initiative. For this reason, a specialized "Citizen Science" sub-application was developed by utilizing Unity3D Platform and C# scripting language.
Field trials for the implementation and optimization of the developed CS protocol took place in three countries: France (Marseille), Greece (National Marine Park of Zakynthos) and Turkey (Izmir). These included briefings to volunteer divers from local dive centres and associations, experimental dives for data collection followed by interviews, questionnaires and discussions, so as to come up with a more simplified list of requirements that clearly address the CIGESMED project objectives and make the data collection and reporting procedures as easy as possible for the participants. During these trials, the idea of developing an educational CS module to ensure a basic understanding of coralligenous bioherms and their associated communities also emerged, and was subsequently constructed.
Preliminary data gathering was performed by the researchers and divers involved in CIGESMED project, thus allowing the assessment of coralligenous sites in four regions: Western Mediterranean, Ionian Sea, Aegean Sea and Levantine Sea.
The developed CS methodological protocol and CIGESMED for divers website (http://cs.cigesmed.eu/) comprise:
The website requires registration from the user in order to be able to submit, view and review data. During the initial registration process, users are requested to submit basic personal data (e.g. name, country of residence, affiliation) and information on their diving profile (i.e. diving experience and certification level), dive computer brand and type (for standardizing temperature data records), past experience from any other CS projects, area of taxonomic interest in cases of professional scientists and enthusiast naturalists, and dive centre (Fig.
The main data submission infrastructure (dive slate and web version) provides fields for reporting information relevant to the characterization of the site and the assessment of its coralligenous assemblages, organized in two sections: (a) basic data and parameters, and (b) ecological observations (Fig.
This section integrates typical geographic and topographic data along with several easily assessed abiotic environmental parameters which can allow a preliminary description of the site, as well as the development of data series for sites receiving multiple visits (Table
Basic information requested in the data submission platform of the on the CIGESMED for divers protocol (* compulsory field).
Observation fields |
Remarks, explanatory texts and observation ranks |
Date of observation* |
Day/Month/Year |
Geographic reference* |
Coordinates in Decimal Degrees (based on Google WGS 84 Web Mercator coordinate system) and/or selection on interactive map |
Name of location or dive site |
If there is any |
Water temperature at predefined depths (e.g. 0, 10, 20, 30, 40 m) |
Temperatures in Celsius degrees (oC) |
Thermocline’s depth |
At what depth did you feel a sharp decrease of temperature? |
Water temperature at the observation depth |
Temperature in Celsius degrees (oC) |
Maximum dive depth |
In meters (m) |
Observation depth* |
In meters (m); this field is required |
Current |
Observation ranks: none, weak, strong |
Visibility |
Observation ranks: clear water, some suspended particles, turbid water |
Vertical extent of the habitat |
Min and max depth of observed coralligenous formations |
Horizontal extent of the habitat |
Observation ranks: less than 5 m, 5-10 m, 10-20 m, more than 20 m |
Habitat continuity |
Observation ranks: isolated patch, discontinuous, continuous |
Slope |
Observation ranks: vertical, sloping, horizontal, overhanging |
Rugosity |
Observation ranks: tiny, small, medium, large |
Orientation of the coralligenous site |
Observation ranks: N, NE, E, SE, S, SW, W, NW |
This section of the CS platform focuses on: (a) the presence and relative abundance of typical conspicuous species of coralligenous assemblages and (b) the recording of pressures and imminent threats. A total of 23 taxa belonging to 7 taxonomic groups were included in the CS protocol (Table
List of coralligenous biota examined in the current CS initiative (* protected species).
RHODOPHYTA |
Calcareous red algae (e.g. Lithophyllum spp. and Mesophyllum spp.) |
Peyssonnelia spp. |
PORIFERA |
Agelas oroides |
Axinella spp. * |
Cliona spp. |
ANTHOZOA |
Eunicella cavolini * |
Eunicella singularis* |
Paramuricea clavata * |
Leptogorgia sarmentosa |
Savalia savaglia* |
Scleractinians (e.g. Leptopsammia pruvoti, Polycyanthus muellerae, Madracis pharensis, Hoplangia durotrix, and Phyllangia americana mouchezii) * |
Corallium rubrum * |
CRUSTACEA |
Homarus gammarus |
Palinurus elephas |
Scyllarides latus * |
BRYOZOA |
Myriapora truncata |
Other erect bryozoans (e.g. Adeonella spp., Smittina spp., Pentapora fascialis, Reteporella spp.) |
ECHINODERMATA |
Centrostephanus longispinus * |
Other sea urchins (e.g. Arbacia lixula, Echinus melo, Paracentrotus lividus, Sphaerechinus granularis) |
PISCES |
Anthias anthias |
Epinephelus marginatus * |
Scorpaena spp. |
Shark egg cases (e.g. Scyliorhinus canicula) |
Typical species/taxa are presented in a list, accompanied by professional grade in situ photographs of the organisms from different Mediterranean areas, and linked to galleries providing additional photographic material (Fig.
A list of 10 types of pressures and threats commonly affecting coralligenous assemblages was included to the protocol (Table
Non-indigenous species: Caulerpa cylindracea |
Non-indigenous species: Asparagopsis spp. |
Mucilaginous aggregations |
Organism necrosis and mortality events |
Sedimentation on coralligenous biota |
Diver recklessness |
Fishing gear |
Litter |
Anchoring |
Urban waste sources nearby |
Other pressures & threats (free text) |
All currently available data reports of coralligenous formations, their conspicuous species and threats are visibly marked on the accumulative map of the CS website (Fig.
Active participation to CIGESMED for divers, as most citizen science initiatives, inherently rewards users with the notion of contribution to the exploration and the conservation of biodiversity, producing useful information out of a recreational activity, while at the same time increasing their knowledge of the marine environment. In addition to these motives, an online rewarding system is supported by the website, accrediting users according to their contribution level (number of observations submitted). As the number of observations is directly linked to diver’s experience and knowledge of the marine realm, 5 levels were assigned to male (Theoi Halioi) and female (Oceanids and Nereides) ancient Greek sea deities (
The rewarding system can potentially encourage fans of online applications and social media but will also function as a potential metric for identifying enthusiast divers and local collaborators interested in supporting localized monitoring activities. In the online platform, all observations and uploaded photographs are linked to the user’s name and constitute intellectual property of the contributor, whilst free for use under a Creative Commons Attribution License (CC-BY). All participants and contributors, including dive and nature associations and clubs are accredited and, in certain cases, could be considered as co-authors in relevant scientific and mass media publications (see acknowledgements and author contributions sections).
The "Citizen Science" sub-application of the LifeWatchGreece mobile app aggregates data from different CS initiatives in order to support a simple and quick view process, assisting sharing of the obtained information. It is available for Android platforms (Mobile/Tablet) and receives data in JSON format from CIGESMED for divers website in real time. The application showcases a simplified version of the observations submitted to the "CIGESMED for divers" website on a map. Users are given the option to select and view details for each observation, such as the list of reported species (Fig.
The engagement of citizens in marine research is particularly important, since professional scientific activities are often restricted by available financial and human resources (
The objectives of this CS initiative extend beyond single-point data collection by providing a way to monitor coralligenous assemblages and assess potential degradation through the creation of long-term data series in sites receiving multiple visits (e.g. Marine Protected Areas). The inclusion in the protocol of several rare, protected, and commercial species (e.g. the over-exploited red coral), could further assist in their monitoring and conservation. This is particularly important in countries where research funds dedicated to environmental assessment and monitoring of the marine environment are low or non-existent; under such circumstances the contribution of skilled citizen scientists could critically enable the persistent collection of qualitative or semi-quantitative data (
The increasingly important role that active volunteers can play in reporting of the presence and spread of marine allochthonous species has been recently pointed out (
Citizen-science approaches are generally acknowledged as a main pathway to assist the progress towards the upscaling of ecological data to the global level (
Sharing data is one of the main objectives of CIGESMED. However, data assembled by non-experts should go through quality control before being used in scientific analyses or reposited to global biodiversity databases (
Following screening and quality control, the data collected by the CIGESMED for divers project will be further used to: (a) calculate the values of indices for the assessment of the "good environmental status" (GES) of the habitat, as required by the Marine Strategy Framework Directive (MSFD). For this purpose, only indices requiring a minimum of information will be used, such as those proposed under the Descriptor 6 of the MSFD (sea-floor integrity) (
During the field trials and discussions with participants, their associations and diving clubs, as well as national MPA authorities, it became evident that a considerable proportion of divers, especially in the eastern Mediterranean, were not aware of the existence and importance of coralligenous assemblages despite the fact that these formed their preferred diving spots. The educational module of the project (i.e. guidelines and website) combined with the experience gained from the participation of divers directly raises public awareness. Experience from the field trials and past CS projects showed that knowledge exchange between citizen scientists and researchers promotes trust and facilitates application of marine conservation schemes (
Charismatic, flagship species (e.g. gorgonians, the dusky grouper) that thrive in coralligenous bioherms can raise the interest of recreational divers and greatly increase their awareness for the habitat as a whole, or their willingness to invest time for data recording. For example, in a recent citizen science project regarding the presence of red coral along the coasts of Italy,
A recent review study by
A series of joint activities organized by the CIGESMED CS researchers, with selected motivated diving associations and MPA management authorities have been scheduled in Greece (e.g. Korinthiakos Gulf and National Marine Park of Zakynthos), France (e.g. Atelier Bleu - CPIE Côte Provençale, Ailes Sportives Airbus Helicopters, Septentrion Environnement), and Turkey (e.g. Derin and Doğa Diving Center, Engin Sea and Nature Sports Center). Those include photo-sampling of permanent quadrats, recording of environmental data (e.g. through the deployment of loggers) and recording of threats and impacts on a scheduled and systematic basis. Joint missions will further include training of the involved divers and demonstrating the proposed activities using the developed CS protocol and e-infrastructure. Furthermore, online photo-contests are to be periodically scheduled and high-quality photographs uploaded by users will be screened on the homepage of the website or could be used in future scientific and educational publications, always acknowledging the photographer. Combined with the CIGESMED for divers CS protocol, these activities, are expected to enhance the creation of long-term data series, increase public awareness and establish communication and knowledge exchange on a more trust-worth and permanent basis.
We are grateful to all citizen scientists and dive centres for participating in field trials (dives), discussions and questionnaire-filling during the preparatory phase of the project; from France (Clément Aldebert, Dorian Guillemain, Eric Vastine, Etienne Pont, Gisèle Chatelat, Jacky Dubar, Joëlle Fossati, Frédéric Sonnerat, Frédéric Zuberer, Laurent Vanbostal, Marielle Ferré, Marina Caillaud, Associations “Little Nemo” and “Atelier Bleu”), Greece (Kostas Konstantinidis, Pavlos Koutsis, Dennis Mohr, Fanis Nikoloudakis, Divers Paradise Diving Centre, Nero Sport Diving Centre and the rangers of the National Marine Park of Zakynthos) and Turkey (Mert Palaoğlu, Bülent Şelli Derin and Doğa Diving Center). We also thank diving clubs for their willingness to participate to the CIGESMED for divers CS initiative, including joined missions for monitoring coralligenous sites on a stable basis (Thessaloniki Dive Club, “Tethys” Association of Recreational Scuba Divers, and “OCEANOS” Association of Achaia Divers). Special acknowledgements are due to researchers and divers from France (Frédéric Zuberer, Sandrine Ruitton, Dorian Guillemain, Romain Bricout, Sylvain Le Bris and Véronique Lamare) and Greece (Yiannis Iliopoulos and Vasilis Lekkas) who provided high-quality photos for the guidelines, slates and website. We thank Jacky Dubar and Etienne Pont for their help in translating texts in Spanish and French, and Eleni Voultsiadou for her help in the Greek translation of the guidelines.
This work was supported by (a) CIGESMED: Coralligenous based Indicators to evaluate and monitor the “Good Environmental Status” of the MEDiterranean coastal waters, funded under the SeasEra Framework (ERAnet), by the French, the Greek and the Turkish governments, the French National Research Agency (ANR: 12-SEAS-0001-01/02/03), the General Secretariat of Research and Technology (GSRT: 12SEAS-12-C2), and TÜBİTAK (112Y393); (b) LifeWatchGreece infrastructure (MIS 384676), funded under the ESFRI Framework by the Greek Government (GSRT), National Strategic Reference Framework (NSRF); (c) the French ministry of superior education and research (LTVA PhD grant) and the CNRS (GG postdoctoral grant).
CIGESMED: Coralligenous based Indicators to evaluate and monitor the "Good Environmental Status" of the MEDiterranean coastal waters (coordination IMBE, CNRS, France)
Wrote first draft of the manuscript: VG, TD, EP, NM, IF, CA
Revised the manuscript: all
Supervised CS initiative: VG, TD, EP, CA
Designed CS protocol: TD, VG, MSi, GG, YI, MSa
Website development, design & administrators: NM, EP
System administration: RD, EP
Smartphone application development: IF, EP
Website support: VG, TD, GG
Website country managers: VG, EP and NM for Greece; GG, LTVA, RD and JPF for France; AD for Turkey
Wrote CS guidelines: GG, LTVA, CD, VG, TD, MSi, MSa, AD, MEC, JPF, RD
Designed slates (printed & web versions): GG, LTVA, RD, CD, NM
Translated website, guidelines & slates: all
Artwork preparation, logo design and photo-editing: EP, TD
Provided photographic material: YI, TD, VG, MSi
Designed rewarding system: MSa, VG, YI, CA
Organized field trials: GG, CD, AD
Website check and preliminary data submission: GG, VG, MSa, MSi, LTVA, YI, RD
Citizen Science WP leader: CA, JPF
Project coordinator: JPF
Guidelines for the implementation of CIGESMED Citizen Science protocol for the study and monitoring of Mediterranean coralligenous assemblages.
Guidelines for the implementation of CIGESMED Citizen Science protocol for the study and monitoring of Mediterranean coralligenous assemblages.
Guidelines for the implementation of CIGESMED Citizen Science protocol for the study and monitoring of Mediterranean coralligenous assemblages.
Guidelines for the implementation of CIGESMED Citizen Science protocol for the study and monitoring of Mediterranean coralligenous assemblages.
Guidelines for the implementation of CIGESMED Citizen Science protocol for the study and monitoring of Mediterranean coralligenous assemblages.
Printed fill-in forms for underwater observation for the implementation of CIGESMED Citizen Science protocol for the study and monitoring of Mediterranean coralligenous assemblages.
Printed fill-in forms for underwater observation for the implementation of CIGESMED Citizen Science protocol for the study and monitoring of Mediterranean coralligenous assemblages.
Printed fill-in forms for underwater observation for the implementation of CIGESMED Citizen Science protocol for the study and monitoring of Mediterranean coralligenous assemblages.
Printed fill-in forms for underwater observation for the implementation of CIGESMED Citizen Science protocol for the study and monitoring of Mediterranean coralligenous assemblages.
Printed fill-in forms for underwater observation for the implementation of CIGESMED Citizen Science protocol for the study and monitoring of Mediterranean coralligenous assemblages.