Biodiversity Data Journal :
Taxonomy & Inventories
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Corresponding author: Zong-Long Luo (luozonglongfungi@163.com)
Academic editor: Alfredo Vizzini
Received: 20 Dec 2022 | Accepted: 01 Mar 2023 | Published: 15 Mar 2023
© 2023 Zheng-Quan Zhang, Chao-Hai Li, Lin Li, Hong-Wei Shen, Jun He, Xi-Jun Su, Zong-Long Luo
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Zhang Z-Q, Li C-H, Li L, Shen H-W, He J, Su X-J, Luo Z-L (2023) Geastrum suae sp. nov. (Geastraceae, Basidiomycota) a new species from Yunnan Province, China. Biodiversity Data Journal 11: e99027. https://doi.org/10.3897/BDJ.11.e99027
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Geastrum is the largest genus of Geastraceae and is widely distributed all over the world. Four specimens which belong to Geastrum were collected during our scientific expedition to Cangshan Mountain, Yunnan, China. Based on morphological characteristics and phylogenetic analysis, a new species was introduced.
Geastrum suae is characterised by its large basidiomata (height 35–70 mm, diameter 18–37 mm) with long stipe (height 10–45 mm), smooth pink exoperidium and sessile globose endoperidial body. Phylogenetic analysis has been carried out, based on the internal transcribed spacer (ITS) and large subunit ribosomal ribonucleic acid (nrLSU) sequence data. The illustration and description for the new taxa are provided.
Geastraceae, ITS, nrLSU, taxonomy, phylogeny
Geastrum Pers. is the largest genus of Geastraceae and was established by
In China, the early systematic report of Geastrum can be found in "Fungi in China" (
Four specimens which belong to Geastrum were collected during our scientific expedition to Cangshan Mountain, Yunnan, China. Morphological and phylogenetic analysis revealed that these specimens are the same species and are different from other species in Geastrum. Therefore, we introduced it as a new species and provided the detailed description and illustration.
Macro-morphological descriptions were based on fresh specimens, which were photographed in the field with notes and laboratory supplemental measurements. The colour is compared with the standard colours in the colorhexa website (https://www.colorhexa.com). Micro-morphological data were obtained from the fresh specimens and observed by using a light microscope, following
The abbreviation for spore measurements (n/m/p) denote “n” spores measured from “m” basidiocarps of “p” specimens. Basidiospore dimensions (and “Q” values) are given as (a) b–av–c (d), where “a” represents the minimum, “d’ the largest, “av” the average “b” and “c” covers a minimum of 90% of the values. “Q” is the length/width ratio of a spore inside view and “Qm” for the average of all spores ± standard deviation. Voucher specimens are deposited in the Herbarium of Cryptogams, Kunming Institute of Botany Academia Sinica (KUN-HKAS).
The DNA extractions were performed from a small piece of the dried basidioma by using Trelief TM Plant Genomic DNA Kit from Tsingke Biotechnology Co., Ltd (Beijing, China). Two DNA regions were amplified: the internal transcribed spacer nuclear ribosomal DNA (ITS), nuclear ribosomal large subunit (nrLSU) with the primer pairs ITS1F/ITS4 and LR0R/LR5, respectively (Table
Gene |
Primer |
Primer sequence (5ʹ-3ʹ) |
References |
ITS |
ITS1F |
CTTGGTCATTTAGAGGAAGTAA |
|
ITS4 |
TCCTCCGCTTATTGATATGC |
|
|
nrLSU |
LR0R |
ACCCGCTGAACTTAAGC |
|
LR5 |
ATCCTGAGGGAAACTTC |
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PCR reactions (25 μl) contained mixture: 12.5 μl 2X SanTaq PCR Master Mix (including MgCl2, dNTP, Taq DNA Polymerase, PCR buffer, loading etc.), 1 μl each of primer, 2 μl DNA solution and 9.5 μl sterilised distilled H2O. The PCR cycling for ITS and nrLSU was as follows: initial denaturation at 94°C for 5 min, followed by 35 cycles at 94°C for 30 sec, 53°C for 30 sec and 72°C for 50 sec and a final extension of 72°C for 10 min. The PCR products were visualised via UV light after electrophoresis on 1% agarose gels stained with ethidium bromide. Successful PCR products were sent to Sangon Biotech Limited Company (Shanghai, China), using forward PCR primers. When sequences have heterozygous INDELS or ambiguous sites, samples were sequenced bidirectionally to make contigs of the amplified regions or verify the ambiguous sites. Raw DNA sequences were assembled and edited in Sequencher 4.1.4 and the assembled DNA sequences were deposited in GenBank (Table
Species, specimens, Collection locality and GenBank accession numbers of sequences used in this study (newly-generated sequences are indicated in bold).
Species |
Strain/Voucher |
Collection locality |
GenBank Accession No. | |
ITS |
nrLSU |
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Geastrum mirabile |
strain: 228-394 |
Japan |
- |
|
Geastrum javanicum |
TNS:TKG-GE-90902 |
Japan |
||
Geastrum mirabile |
TNS:KH-JPN10-714 |
Japan |
||
Geastrum parvistriatum |
MA-Fungi 69583 |
Spain |
||
Geastrum parvistriatum |
Herb. Zamora 272 |
Spain |
||
Geastrum striatum |
Herb. Zamora 257 |
Spain |
||
Geastrum campestre |
Herb. Zamora 283 |
Spain |
||
Geastrum aff. arenarium |
Herb. Zamora 76 |
Spain |
||
Geastrum lageniforme |
Herb. Zamora 316 |
Spain |
||
Geastrum cf. calceum |
UFRN-Fungos 723 |
Brazil |
||
Geastrum cf. calceum |
MA-Fungi 83761 |
Argentina |
||
Geastrum aff. hariotii |
Börge Petterson 2070 |
Mozambique |
||
Geastrum cf. saccatum |
Herb. Sunhede 7749 |
Australia |
||
Geastrum hieronymi |
MA-Fungi 83767 |
Argentina |
||
Geastrum cf. stipitatum |
Herb. Zamora 528 |
Brazil |
||
Geastrum albonigrum |
MA-Fungi 36140-2 |
Panama |
||
Geastrum aff. arenarium |
MA-Fungi 68191 |
Spain |
||
Geastrum cf. arenarium |
MA-Fungi 83760 |
Argentina |
||
Geastrum argentinum |
LPS 48446 |
Argentina |
||
Geastrum argentinum |
MA-Fungi 82605 |
Argentina |
||
Geastrum berkeleyi |
MA-Fungi 74668 |
Spain |
||
Geastrum berkeleyi |
Herb. Sunhede 7724 |
Sweden |
||
Geastrum berkeleyi |
Herb. Zamora 504 |
Sweden |
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Geastrum campestre |
Herb. Sunhede 7575 |
Sweden |
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Geastrum campestre |
MICH 28566 |
USA |
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Geastrum corollinum |
MA-Fungi 5746 |
Spain |
||
Geastrum corollinum |
Herb. Sunhede 7744 |
Sweden |
||
Geastrum coronatum |
Herb. Zamora 266 |
Spain |
||
Geastrum coronatum |
Herb. Zamora 522 |
Sweden |
||
Geastrum coronatum |
MICH 28567 |
USA |
||
Geastrum aff. coronatum |
MICH 72012 |
USA |
||
Geastrum aff. coronatum |
MICH 72014 |
USA |
||
Geastrum elegans |
Herb. Zamora 189 |
Spain |
||
Geastrum elegans |
UPS F-560810 |
Sweden |
||
Geastrum entomophilum |
MA-Fungi 70785 |
Brazil |
||
Geastrum fimbriatum |
Herb. Zamora 234 |
Spain |
||
Geastrum fimbriatum |
Herb. Sunhede 7739 |
Sweden |
||
Geastrum flexuosum |
UPS F-119844 |
Sweden |
||
Geastrum floriforme |
MA-Fungi 69173 |
Spain |
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Geastrum floriforme |
Herb. Zamora 453 |
Spain |
||
Geastrum fornicatum |
Herb. Zamora 255 |
Spain |
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Geastrum fornicatum |
MA-Fungi 30749 |
Spain |
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Geastrum fuscogleba |
NY Trappe 1071 |
USA |
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Geastrum fuscogleba |
NY Trappe 9500 |
USA |
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Geastrum glaucescens |
MA-Fungi 83762 |
Argentina |
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Geastrumglaucescens |
MA-Fungi 83763 |
Argentina |
||
Geastrum aff. glaucescens |
MA-Fungi 83764 |
Argentina |
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Geastrum hariotii |
MA-Fungi 83765 |
Argentina |
||
Geastrum aff. hariotii |
MA-Fungi 78296 |
Brazil |
||
Geastrum aff. hariotii |
MA-Fungi 78289 |
Brazil |
||
Geastrum hieronymi |
MA-Fungi 83766 |
Argentina |
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Geastrum kotlabae |
MA-Fungi 39563 |
Spain |
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Geastrum kotlabae |
Herb. Zamora 440 |
Spain |
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Geastrum aff. kotlabae |
MA-Fungi 33300 |
Tanzania |
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Geastrum lageniforme |
Herb. Zamora 207 |
Spain |
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Geastrum aff. lageniforme |
MA-Fungi 83768 |
Argentina |
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Geastrum aff. lageniforme |
COFC Hama 327 |
Niger |
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Geastrum aff. lageniforme |
MA-Fungi 83770 |
Argentina |
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Geastrum aff. lageniforme |
MA-Fungi 83769) |
Argentina |
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Geastrum aff. lageniforme |
MA-Fungi 78398 |
Portugal |
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Geastrum aff. lageniforme |
Herb. Ribes 221210-01 |
Spain |
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Geastrum melanocephalum |
Herb. Zamora 34 |
Spain |
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Geastrum melanocephalum |
Herb. Sunhede 7737 |
Sweden |
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Geastrum michelianum |
Herb. Sunhede 7738 |
Sweden |
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Geastrum michelianum |
Herb. Zamora 227 |
Spain |
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Geastrum aff. michelianum |
MA-Fungi 83771 |
Argentina |
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Geastrum minimum |
Herb. Zamora 191 |
Spain |
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Geastrum minimum |
Herb. Sunhede 7746 |
Sweden |
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Geastrum minimum |
MICH 72010 |
USA |
||
Geastrum minimum |
MICH 28119 |
Spain |
||
Geastrum minimum |
MA-Fungi 31530 |
USA |
||
Geastrum minimum |
MA-Fungi 86669 |
Sweden |
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Geastrum morganii |
Herb. Lebeuf HRL0177 |
Canada |
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Geastrum aff. morganii |
Herb. Zamora 367 |
Spain |
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Geastrum aff. morganii |
Herb. Zamora 525 |
Spain |
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Geastrum aff. morganii |
MA-Fungi 83772 |
Argentina |
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Geastrum aff. morganii |
MA-Fungi 83773 |
Argentina |
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Geastrum ovalisporum |
MA-Fungi 47184 |
Bolivia |
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Geastrum pectinatum |
Herb. Zamora 252 |
Spain |
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Geastrum pectinatum |
UPS F-560803 |
Sweden |
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Geastrum pectinatum |
UPS F-09935 (161483) |
Tanzania |
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Geastrum pectinatum |
MA-Fungi 83774 |
Argentina |
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Geastrum pleosporum |
MA-Fungi 56971 |
Cameroon |
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Geastrum pouzarii |
MA-Fungi 2944 |
Czechoslovakia |
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Geastrum pouzarii |
Herb. Sunhede 7494 |
Czechoslovakia |
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Geastrum pseudolimbatum |
Herb. Zamora 231 |
Spain |
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Geastrum pseudolimbatum |
UPS F-560804 |
Sweden |
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Geastrum quadrifidum |
Herb. Zamora 170 |
Spain |
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Geastrum quadrifidum |
MA-Fungi 86671 |
Sweden |
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Geastrum quadrifidum |
MICH 72512 |
USA |
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Geastrum rufescens |
Herb. Zamora 253 |
Spain |
||
Geastrum rufescens |
Herb. Zamora 274 |
Spain |
||
Geastrum cf. saccatum |
MA-Fungi 47185-2 |
Bolivia |
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Geastrum cf. saccatum |
MA-Fungi 83775 |
Argentina |
||
Geastrum cf. saccatum |
UPS F-530056 |
Japan |
||
Geastrum cf. saccatum |
MA-Fungi 83777 |
Argentina |
||
Geastrum cf. saccatum |
Herb. Zamora 260 |
Spain |
||
Geastrum cf. saccatum |
Herb. Zamora 461 |
Spain |
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Geastrum cf. saccatum |
COFC Hama 343 |
Niger |
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Geastrum cf. saccatum |
MA-Fungi 83778 |
Argentina |
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Geastrum schmidelii |
Herb. Zamora 279 |
Spain |
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Geastrum schmidelii |
UPS F-560805 |
Sweden |
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Geastrum cf. schweinitzii |
S Henrik Kylin 1983 30.X |
Papua New Guinea |
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Geastrum cf. schweinitzii |
MA-Fungi 83779 |
Argentina |
||
Geastrum cf. schweinitzii |
MA-Fungi 36141 |
Panama |
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Geastrum cf. schweinitzii |
MA-Fungi 83780 |
Argentina |
||
Geastrum smardae |
Herb. Lebeuf HRL 0160 |
Canada |
||
Geastrum smardae |
Herb. Zamora 527 |
Spain |
||
Geastrum smithii |
MA-Fungi 83783 |
Argentina |
||
Geastrum striatum |
MA-Fungi 86672 |
Sweden |
||
Geastrum “triplex” |
UPS F-014630 (213863) |
Madagascar |
||
Geastrum “triplex” |
MA-Fungi 83784 |
Argentina |
||
Geastrum cf. velutinum |
MA-Fungi 83785 |
Argentina |
||
Geastrum cf. velutinum |
MA-Fungi 83786 |
Argentina |
||
Geastrum cf. velutinum |
Herb. Ribes 311207-62 |
Spain |
||
Geastrum cf. velutinum |
MA-Fungi 83787 |
Peru |
||
Geastrum violaceum |
BAFC 51671 |
Argentina |
||
Geastrum violaceum |
MA-Fungi 82487 |
Argentina |
||
Geastrum sp.1 |
MA-Fungi 83788 |
Argentina |
||
Geastrum sp.1 |
MA-Fungi 83789 |
Argentina |
||
Geastrum sp.2 |
MA-Fungi 31143 |
Spain |
||
Geastrum sp.2 |
MA-Fungi 37546 |
Spain |
||
Geastrum sp.3 |
MA-Fungi 83790 |
Argentina |
||
Geastrum sp.4 |
MA-Fungi 83791 |
Peru |
||
Geastrum sp.5 |
Herb. Zamora 145 |
Spain |
||
Geastrum sp.5 |
Herb. Zamora 450 |
Spain |
||
Geastrum sp.6 |
MA-Fungi 83792 |
Argentina |
||
Geastrum sp.7 |
MA-Fungi 83793 |
Argentina |
||
Geastrum sp.7 |
MA-Fungi 83794 |
Argentina |
||
Geastrum sp.8 |
MA-Fungi 83795 |
Argentina |
||
Geastrum hirsutum |
UFRN-Fungos 1214 |
Brazil |
- |
|
Geastrum javanicum |
UFRN-Fungos 1215 |
Brazil |
- |
|
Geastrum minutisporum |
CORD14 |
Argentina |
- |
|
Geastrum minutisporum |
CORD15 |
Argentina |
- |
|
Geastrum pusillipilosum |
UFRN:Fungos 2315 |
Brazil |
||
Geastrum pusillipilosum |
UFRN:Fungos 2759 |
Brazil |
||
Geastrum piquiriunense |
UFRN:Fungos:2892 |
Brazil |
||
Geastrum hirsutum |
INPA:259950 |
Brazil |
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Geastrum rubropusillum |
UFRN:Fungos:2308 |
Brazil |
||
Geastrum baculicrystallum |
UFRN:Fungos:2835 |
Brazil |
||
Geastrum brunneocapillatum |
UFRN:Fungos:2286 |
Brazil |
||
Geastrum rubellum |
UFRN:Fungos:2844 |
Brazil |
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Geastrum neoamericanum |
UFRN:Fungos:2302 |
Brazil |
||
Geastrum courtecuissei |
LIP:FH 2004090503 |
Guadeloupe |
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Geastrum rubellum |
LIP:CL/MART 8067B |
Martinique |
- |
|
Geastrum rubellum |
LIP:PAM/MART 12.100 |
Martinique |
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Geastrum neoamericanum |
LIP:JLC 12030103 |
French |
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Geastrum suae |
HKAS 123795 (Holotype) |
China |
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Geastrum suae |
HKAS 123794 |
China |
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Geastrum suae |
HKAS 123793 |
China |
||
Geastrum suae |
HKAS 123796 (Paratype) |
China |
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Geastrum hariotii |
MA-Fungi 80070 |
Dominican Republic |
- |
|
Geastrum aff. lageniforme |
MA-Fungi 79056 |
Brazil |
- |
|
Geastrum cf. saccatum |
MA-Fungi 83776 |
Argentina |
- |
|
Geastrum cf. schweinitzii |
S Henrik Kylin 842 |
Fiji |
- |
|
Geastrum cf. velutinum |
MA-Fungi 73247 |
India |
- |
|
Geastrum michelianum |
Herb. Ribes 231208-31 |
Spain |
- |
|
Geastrum setiferum |
MA-Fungi 83781 |
Argentina |
- |
|
Geastrum setiferum |
MA-Fungi 83782 |
Argentina |
- |
|
Geastrum velutinum |
BJTC 221 |
China |
- |
|
Geastrum velutinum |
BJTC 598 |
China |
- |
|
Geastrum yanshanense |
BJTC 381 |
China |
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Geastrum yanshanense |
BJTC 057 |
China |
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Geastrum yanshanense |
BJTC 255 |
China |
- |
|
Schenella pityophila |
Herb. Zamora 530 |
Spain |
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Schenella pityophila |
Herb. Zamora 531 |
Spain |
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Myriostoma coliforme |
MA-Fungi 83759 |
Argentina |
Sequence data of two partial loci, internal transcribed spacer region (ITS) and the large subunit ribosomal RNA gene (nrLSU) were analysed. All the sequences, except those which were obtained from this study, were selected from GenBank for phylogenetic analyses (Table
The Maximum Likelihood (ML) and Bayesian Inference (BI) methods were used to analyse the combined dataset of ITS and nrLSU sequences. ML analysis was conducted with RAxML-HPC2 on the CIPRES Science Gateway (
Bayesian analysis was performed with MrBayes v.3.2 (
The phylogenetic tree was visualised with FigTree version 1.4.0 (
Unexpanded basidiomata 13–28 mm, cylindrical to ellipsoidal, very light grey (#fdfdfd) to very pale red (#ffe6e6) with a slight protrusion, rough. Expanded basidiomata height 35–70 mm, diameter 18–37 mm, deep saccate, Exoperidium splitting into 6, arched, not hygrometric, prosthecae length 23–35 mm, diameter 5–13 mm, exoperidium attached to the rhizomorphs. Rhizomorphs with 0.1–5.4 μm hyphae, fibrous and transparent, white (#ffffff). Mycelial layer 49.5–59.0 μm, consisting of transparent hyphae (1.0–3.5 μm) with thin walls and no septum, curved. Fibrous layer 6.5–16.5 μm, transparent, curved, thick-walled hyphae (1.1–5.0 μm) smooth, transparent to cream (#fffdd0), pure red (#e60000) to dark red (#9a0000) when stained with Congo red. Pseudoparenchymatous layer 2.5–19.3 × 2.7–30.4 μm, irregular shape, mycelium is transparent when fresh, pure orange (#ffa500) to moderate pink (#cc6691) when stained with Congo red, the thickness of the pseudoparenchyma layer is about 1.0–1.3 mm, very soft pink (#d98ca0). Endoperidial body 11–23 mm, globose, sessile, very light grey (#dfdfdf) to dark grey (#a0a0a0), with lighter reticulation. Endoperidial surface with some protruding hyphae, endoperidium is interwoven by transparent hyphae, fibrous. Peristome fibrillose, unpleated, wide conical, with obvious oral margin ring. Columella obvious very light grey (#f4f4f4 to #e0e0e0). Eucapillitium hyphae 1.0–5.5 μm, thick-walled, with distinct cavities, smooth, the ends tapering and are bluntly rounded (Fig.
Geastrum suae (KUN-HKAS 123795, holotype). a fresh unexpanded fruiting bodies; b, c fresh mature fruiting bodies; d mycelial layer, fibrous layer and pseudoparenchymatous layer; e hyphae of mycelial layer; f pseudoparenchymatous layer (cells in the stack); g, h eucapillitium hyphae; i-k basidiospores (LM); l-n basidiospores (SEM). Scale bars: a = 10 mm; b, c, e = 20 mm; d = 80 μm; f, g, i-k = 10 μm; h = 70 μm; l = 1 μm; m, n = 500 nm.
Holotype (40/2/1) 4.5–5.3–6.0 × (4.5)5.0–5.4–6.0 μm, Q = (0.80)0.83–1.12(1.14), Qm= 0.98 ± 0.08, n = 40, including spines truncated at the apex ornamentation, with 0.2–0.5 µm high warts, ornamentation isolated or coalescing crest-like warts. Basidia not observed.
Geastrum suae is characterised by long stipes and larger basidiomata; Pseudoparenchymatous layer is pink, smooth; globose endoperidial body, grey; the ends of eucapillitium hyphae taper and are bluntly rounded; and they live in groups.
The species is named suae (Lat.), in memory of the Chinese mycologist Prof. Hong-Yan Su, who kindly helped the authors in many ways and sadly passed away on 3 May 2022 during the preparation of the current paper.
It grows in groups on the ground in mixed coniferous and broad-leaved forests where there are Alnus nepalensis and Pinus yunnanensis, with thick humus. Currently, it is known only from Cangshan Mountain.
Firstly, we constructed the ML tree of Geastrum genus, based on ITS (1–540 bp) and nrLSU (541–1498 bp) genes and found that G. suae is in Sect. Mycelioatroma. The Maximum Likelihood bootstrap values (ML) equal to or greater than 70% are given above each node (Fig.
Phylogenetic tree of the new Geastrum species and related taxa which belong to sect. Myceliostroma, based on ITS and nrLSU sequence data. Branches are labelled with bootstrap values (ML) higher than 70% and posterior probabilities (PP) higher than 0.95. The new species are shown in red bold.
Phylogenetic analysis showed that four new collections of G. suae clustered together with high bootstrap support and are sister to G. rubellum with good bootstrap support (74% ML/1 PP Fig.
Geastrum suae can be easily recognised by the basidiomata with pink neat, smooth 6-lobed ectoderm, globose sessile endoperidium and longer prosthecae.
In the phylogenetic inferences, Geastrum suae is sister to G. rubellum, which is known from the biome Tropical and Subtropical Moist Broadleaf Forests in Brazil (
The research was financed by the National Natural Science Foundation of China (Project No. 32060006). This study was also supported by the Yunnan Fundamental Research Projects (grant No. 202201BC070001). The authors thank Kai Wang for the assistance in sample collection, thank Dan-Feng Bao for sharing the knowledge of phylogeny and thank Long-Li Li for giving instruction for microscopic measurement.