Biodiversity Data Journal :
Data Paper (Biosciences)
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Corresponding author: Gabriel Nève (gabriel.neve@imbe.fr)
Academic editor: Paolo Biella
Received: 05 Jan 2023 | Accepted: 10 Feb 2023 | Published: 13 Mar 2023
© 2023 Jean-Yves Meunier, Benoît Geslin, Mehdi Issertes, Gilles Mahé, Frédéric Vyghen, Harold Labrique, Yves Dutour, Vincent Poncet, Jérémy Migliore, Gabriel Nève
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Meunier J-Y, Geslin B, Issertes M, Mahé G, Vyghen F, Labrique H, Dutour Y, Poncet V, Migliore J, Nève G (2023) Apoidea of the collections of Lyon, Aix-en-Provence, Marseille and Toulon Museums of Natural History (France). Biodiversity Data Journal 11: e99650. https://doi.org/10.3897/BDJ.11.e99650
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Many insect species have shown dramatic declines over the last decades, as a result of man-related environmental changes. Many species which were formerly widespread are now rare. To document this trend with evidence, old records of collected specimens are vital.
We provide here the data on 9752 bee (Hymenoptera: Apoidea) specimens hosted in several museums of south-east France: Musée des Confluences in Lyon, Muséum d’Histoire Naturelle de Marseille, Muséum d’Aix-en-Provence and the Muséum Départemental du Var in Toulon. Most of the specimens (9256) come from France and include data on 552 named species. For most of these specimens, the geographical location, including geographical coordinates, is based on the locality (town or village) where they were collected. The specimens were captured from the beginning of the nineteenth century to 2018. The identifications of 1377 specimens, mainly belonging to the genus Bombus, are considered reliable, as these were performed or been checked since 2009. All the other reported identifications are the original ones given by the original collectors.
Hymenoptera, bees, museum, France, record, Apoidea, Bombus, Apidae, Halictidae, Andrenidae, Megachilidae, Colletidae, Melittidae
There has been a dramatic decline in insect populations over the last 70 years, both in terms of abundance (
Amongst the various roles of insects in ecosystems, the pollination process is a key component, both in natural and man-made ecosystems (
The aim of the present paper is to document the collections of Apoidea hosted by the Musée des Confluences in Lyon (MHNL), the Muséum d’Histoire Naturelle de Marseille (MHNM), the Muséum d’Aix-en-Provence (MHNAix) and the Muséum Départemental du Var (MDV) in Toulon (Table
Museum acronyms | Museum Full Names | Total number of specimens | Number of specimens from France | Number of French geolocalised specimens | Number of specimens identified since 2000 |
MHNAix | Muséum d'Histoire Naturelle d'Aix-en-Provence | 255 | 243 | 153 | 0 |
MHNL | Musée des Confluences (Lyon) | 8790 | 8312 | 8239 | 2646 |
MHNM | Muséum d'Histoire Naturelle de Marseille | 612 | 606 | 589 | 0 |
MDV | Muséum Départemental du Var (Toulon) | 95 | 95 | 95 | 95 |
Total | 9752 | 9256 | 9076 | 2741 |
Ultimately, the knowledge of past occurrences of bees will be of outmost importance for documenting the evolution of bee richness and their distribution in France and to set the basis for a future French Red List of bees which still does not exist to this day.
The aim of this publication is to make public the records of Apoidea stored in the four natural history Museums of south-east France. Researchers will, therefore, know where the specimens are stored, how numerous they are and when and where they were collected. Information on who identified the specimens and when is also given, as this is important given the on-going changes in the taxonomic treatment of many species (
Apoidea collections in the natural history museums of south-east France.
All available data on the Apoidea specimens stored in the four natural history Museums were input into a table format. Most original labels include location (usually the municipality), date (sometimes only partly, such as the month), collector and an assigned species name. As the taxonomy of the Apoidea has dramatically changed over the last 150 years, we believe that an important part of the old material should be re-identified according to current knowledge. This could be done only for a part of the specimens: Bumblebees (Bombus) in the Musée des Confluences were recently revised by MI, GM and FV and all specimens at the MDV were identified since 2009; their identificationVerificationStatus column was coded “1”. The data on all the other specimens have retained their original species identification and the identificationVerificationStatus column was coded “0”.
The collectors of Apoidea specimens in the four Museums were: René Grilat (?-1915) [2645 specimens], Georges Audras (1881 -1970) [2028 specimens], Maurice Dauzet (1927-2021) [1752 specimens], Claudius Côte (1881-1956) [821 specimens], Jean Timon-David (1902-1968) [606 specimens], Pierre Réal (1922-2009) [392 specimens], Jean-Hubert Chabrier (1791-1884) [240 specimens], Claude Dufay (1926-2001) [133 specimens], Philippe Grivot [131 specimens], Nicolas Bermante [128 specimens], Jacques Hamon (1926-2022) [56 specimens], Guy Chavanon (born 1951) [78 specimens], Robert Gonon (1908-1994) [53 specimens], Roland Allemand (1950-2013) [29 specimens] and several others.
On top of the data given on the original labels, we have added the Department (French administrative division) and the coordinates of the centre of the locality where each specimen was collected (columns decimalLatitude and decimalLongitude). This gives an approximation of ca. 5 km, depending on each locality size.
The specialists whose recent identifications we relied on are Holger Dathe (genus Hylaeus), Robert Fonfria (mainly Families Megachilidae and Andrenidae), David Genoud (genus Andrena), Michael Kuhlmann (genus Colletes), Gérard Le Goff (genus Anthophora), Hugues Mouret (genera Anthophora and Andrena), Alain Pauly (family Halictidae), Stephan Risch (genus Eucera) and Erwin Scheuchl (genus Andrena) for the 89 specimens in the MDV collections and MI, GM and FV for 1288 Bombus specimens in MHNL.
The collections of Apoidea in the Natural History Museums of Aix-en-Provence, Lyon, Marseille and Toulon were surveyed systematically. A total of 9752 specimens were recorded. A total of 1377 French specimens were either checked in MHNL or identified recently by various specialists, as in the case of the specimens from Porquerolles (Hyères, Var) in MDV.
For all other specimens, the nomenclature was checked against the list of European bees used for the IUCN Red List (
As far as possible, the locality of origin of the specimen was identified and its latitude and longitude given by the website https://www.geoportail.gouv.fr/ was input. In a few cases, such as passes or forests between neighbouring localities, the precise coordinates of the location were input. In the CSV dataset format, fields are separated by tabs, all encoding is UTF-8, which allowed for all diacritic signs to be retained. Apostrophes (') were used wherever appropriate in locality names. Uncertain readings from the labels are indicated by a question mark in the verbatimEventDate or verbatimLocality fields. If the locality name was uncertain, no coordinates were given.
The Apoidea specimens mainly come from south-east France (Fig.
Departments |
N |
Ain |
554 |
Aisne |
1 |
Allier |
4 |
Alpes-de-Haute-Provence |
29 |
Alpes-Maritimes |
16 |
Ardèche |
80 |
Ariège |
28 |
Aude |
5 |
Aveyron |
4 |
Bouches-du-Rhône |
874 |
Cantal |
5 |
Charente |
4 |
Charente-Maritime |
10 |
Cher |
1 |
Corrèze |
24 |
Corse |
14 |
Corse-du-Sud |
10 |
Doubs |
86 |
Drôme |
296 |
Essonne |
3 |
Finistère |
18 |
Gard |
73 |
Gers |
14 |
Gironde |
29 |
Guyane française |
1 |
Haute-Corse |
31 |
Haute-Garonne |
15 |
Haute-Loire |
308 |
Haute-Saône |
64 |
Haute-Savoie |
71 |
Hautes-Alpes |
36 |
Hautes-Pyrénées |
8 |
Hérault |
76 |
Indre |
2 |
Isère |
219 |
Jura |
155 |
Landes |
3 |
Loire |
1141 |
Loiret |
2 |
Lozère |
2 |
Manche |
1 |
Morbihan |
5 |
Moselle |
1 |
Pas-de-Calais |
1 |
Puy-de-Dôme |
11 |
Pyrénées-Atlantiques |
6 |
Pyrénées-Orientales |
23 |
Rhône |
4253 |
Saône-et-Loire |
1 |
Sarthe |
41 |
Savoie |
114 |
Seine-et-Marne |
1 |
Seine-Maritime |
2 |
Somme |
8 |
Tarn-et-Garonne |
2 |
Territoire de Belfort |
11 |
Var |
243 |
Vaucluse |
63 |
Vendée |
7 |
Vosges |
6 |
Yvelines |
1 |
Unknown |
139 |
TOTAL |
9256 |
41 and 51 Latitude; 10 and -5 Longitude.
Specimens of at least 552 species are present in the collections of the four surveyed natural history Museums. The specimens belong to the families Apidae [3153 specimens], Halictidae [1866 specimens], Andrenidae [1597 specimens], Megachilidae [1092 specimens], Colletidae [527 specimens] and Melittidae [52 specimens]. Forty-one genera have been identified; the genera Bombus and Andrena are present with more than a thousand specimens each (Table
Genus | Number of specimens |
Amegilla | 4 |
Ammobates | 4 |
Andrena | 1056 |
Anthidiellum | 6 |
Anthidium | 124 |
Anthophora | 193 |
Apis | 15 |
Biastes | 19 |
Bombus | 1376 |
Ceratina | 85 |
Chelostoma | 49 |
Coelioxys | 73 |
Colletes | 138 |
Dasypoda | 11 |
Dioxys | 3 |
Dufourea | 2 |
Epeolus | 43 |
Eucera | 80 |
Halictus | 390 |
Heriades | 4 |
Hoplitis | 19 |
Hylaeus | 94 |
Icteranthidium | 2 |
Lasioglossum | 227 |
Lithurgus | 16 |
Macropis | 2 |
Megachile | 137 |
Melecta | 29 |
Melitta | 8 |
Nomada | 521 |
Osmia | 188 |
Panurgus | 76 |
Pasites | 6 |
Rhodanthidium | 13 |
Sphecodes | 205 |
Stelis | 27 |
Systropha | 10 |
Tetralonia | 2 |
Thyreus | 3 |
Trachusa | 2 |
Xylocopa | 74 |
Species |
Number of specimens |
Bombus lapidarius |
161 |
Bombus lucorum |
141 |
Bombus pascuorum |
141 |
Apis mellifera |
92 |
Bombus terrestris |
79 |
Bombus pratorum |
75 |
Bombus sylvestris |
62 |
Bombus soroeensis |
56 |
Andrena flavipes |
53 |
Halictus scabiosae |
52 |
Rank | Scientific Name |
---|---|
superfamily | Apoidea |
family | Apidae |
family | Halictidae |
family | Andrenidae |
family | Megachilidae |
family | Colletidae |
family | Melittidae |
The oldest specimens are those collected by Jean-Hubert Chabrier (1791-1884), hosted in MHNAix, which presumably come mostly from the first half of the nineteenth century, but do not bear any date information (
This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 Licence. All work derived from the present study should cite it appropriately, including the Museum where the material is held.
The whole dataset includes 9752 Apoidea specimens from the Muséum d’Histoire Naturelle d’Aix en Provence (MHNAix), the Musée des Confluences, Lyon (MHNL), the Muséum d’Histoire Naturelle de Marseille (MHNM) and the Muséum Départemental du Var, Toulon (MDV). This dataset uncludes 1377 specimens with a recent reliable identification and 9256 with geolocalisation within France (Table
Column label | Column description |
---|---|
occurrenceID | Individual identification: combination of Museum name, collection identification, box number and specimen number within each box. |
basisOfRecord | The specific nature of the data record (i.e. PreservedSpecimen). |
eventDate | Event date in the format YYYY-MM-DD if the date is known to the day, or YYYY-MM if only the month and the year are known, or YYYY if only the year is known. |
Year | Year of capture if known. |
Month | Month of capture if known. |
Day | Day of capture if known. |
verbatimEventDate | Date of capture, if known, in format DD/MM/YYYY. Missing data are indicated by ? |
scientificName | Lowest taxonomic rank possible, usually the species name. If the species is unknown, the genus or family names are given. |
Kingdom | Kingdom (i.e. Animalia). |
Phylum | Phylum (i.e. Arthropoda). |
Class | Class (i.e. Insecta). |
Order | Order (i.e. Hymenoptera). |
family | Family name. |
genus | Genus name. |
specificEpithet | Species epithet of the scientificName. |
sex | Male (M) or Female (F). |
taxonRank | Taxonomic rank of the most specific name in the scientificName. |
IdentifiedBy | Name of the entomologist who identified the specimen, if indicated by the label. |
dateIdentified | Year of identification, if known. |
identificationVerificationStatus | Whether (coded 1) or not (coded 0) the identification was recently (since 2009) checked. |
decimalLatitude | Geographic latitude (in decimal degrees) of the location. |
decimalLongitude | Geographic longitude (in decimal degrees) of the location. |
geodeticDatum | Coordinate system and set of reference points upon which the geographic coordinates are based (i.e. WGS 84). |
coordinateUncertaintyInMeters | Uncertainty in coordinates. As the coordinates are usually those of the locality of the record, uncertainty is in the range of 5000 m. |
Country | Country of capture, in French, as indicated by the label. |
countryCode | Two letter country code of the specimen origin. |
stateProvince | French departmental administrative division. In the case of non-French data, any relevant country administrative subdivision. |
locality | Location of capture, usually the locality. |
verbatimLocality | Any geographical indication on the label. |
InstitutionCode | Museum where the specimen is held. |
CatalogNumber | Box identifier within each Museum. |
occurrenceRemarks | Any ecological data or comment on the label |
recordedBy | Name of collector (i.e. legit information). |
OrganismQuantity | Number of individuals bearing the same label (usually 1). |
OrganismQuantityType | individuals. |
previousIdentifications | Species name originally given by the original collector, if different from scientificName. |
georeferencedBy | Identity of the person who added the Latitude and longitude data, usually Meunier, Jean-Yves. |
georeferenceProtocol | How the georeference was computed, i.e. from label data (verbatimLocality). |
georeferenceSources | Georeference code was inferred from geoportail.fr. |
georeferencedDate | Georeference work was mainly performed in 2021, with a few additions in 2023. |
language | The data set is mainly written in French, apart from column headings, which are in English |
CollectionCode | Identifier of collection within each Institution where specimens are held. |
locationRemarks | Several localities could not be identified unambiguously, this is indicated by “localité incertaine” in this field. |
Dried and pinned specimens.
MHNAix: Muséum d’Histoire Naturelle d’Aix en Provence (Bouches-du-Rhône)
MHNL: Musée des Confluences, Lyon (Rhône)
MHNM: Muséum d’Histoire Naturelle de Marseille (Bouches-du-Rhône)
MDV: Muséum Départemental du Var, Toulon (Var)
Musée des Confluences, Lyon (MHNL)
Muséum d’Histoire Naturelle de Marseille (MHNM)
Muséum d’Histoire Naturelle d’Aix-en-Provence (MHNAix)
Muséum Départemental du Var, Toulon (MDV)
MHNL, MHNM, MHNAix, MDV.
MHNL: Harold Labrique: harold.labrique@museedesconfluences.fr
MHNM: Vincent Poncet: vponcet@marseille.fr
MHNAix: Yves Dutour: geologie_aix@yahoo.fr
MDV: Jérémy Migliore: jmigliore@var.fr
dataset management
Gabriel Nève: gabriel.neve@imbe.fr
Altogether, the studied collections hold a total of 9752 Apoidea specimens at the time of writing. A total of 9256 specimens are from mainland France or Corsica (Fig.
Unfortunately, 5002 of the 9255 French specimens do not bear a date of collection. For some of these, the time frame was guessed using the biographic data of the collectors. If we hypothesise that the specimens from the Chabrier Collection were collected during the first half of the 19th century and the ones from Côte Collection during the first half of the 20th century, most of the specimens were collected since 1900, equally divided (about 1500 specimens) in each of the time spans 1900-1949, 1950-1999 and 2000-2018 (Fig.
The temporal distribution of the data according to the IUCN criteria of the European fauna (Nieto et al. 2014) shows that most specimens belonging to endangered species were collected either in the years 1901-1950, or in the years 2000-2018 (Fig.
Numbers of French specimens of species classified as endangered in Europe, according to time-frames and Museums where held.
Time frame | Species | Museum | Number of specimens |
1901-1950 | Lasioglossum laeve | MHNL | 3 |
1901-1950 | Lasioglossum quadrisignatum | MHNL | 2 |
1901-1950 | Lasioglossum subfasciatum | MHNL | 2 |
1901-1950 | Melitta melanura | MHNL | 3 |
1901-1950 | Trachusa interrupta | MHNM | 5 |
1901-1950 | Osmia maritima | MHNL | 1 |
1951-2000 | Trachusa interrupta | MHNL | 1 |
2001-2018 | Colletes collaris | MDV | 2 |
2001-2018 | Lasioglossum breviventre | MHNL | 2 |
2001-2018 | Lasioglossum laeve | MHNL | 3 |
2001-2018 | Trachusa interrupta | MHNL | 1 |
unknown | Halictus carinthiacus | MHNL | 1 |
unknown | Halictus semitectus | MHNL | 8 |
unknown | Lasioglossum laeve | MHNL | 4 |
unknown | Lasioglossum quadrisignatum | MHNL | 16 |
unknown | Lasioglossum subfasciatum | MHNL | 7 |
unknown | Melitta melanura | MHNL | 3 |
unknown | Trachusa interrupta | MHNL | 6 |
Total | 70 |
Numbers of French specimens of species classified as vulnerable in Europe, according to time-frames and Museums where held.
Time frame | Species | Museum | Number of specimens |
1801-1850 | Bombus muscorum | MHNAix | 2 |
1901-1950 | Bombus confusus | MHNL | 3 |
1901-1950 | Bombus distinguendus | MHNL | 1 |
1901-1950 | Bombus pomorum | MHNL | 10 |
1951-2000 | Bombus alpinus | MHNL | 2 |
1951-2000 | Bombus confusus | MHNL | 4 |
1951-2000 | Bombus distinguendus | MHNL | 1 |
1951-2000 | Bombus gerstaeckeri | MHNL | 1 |
1951-2000 | Bombus muscorum | MHNL | 3 |
2001-2018 | Bombus confusus | MHNL | 6 |
2001-2018 | Bombus muscorum | MHNL | 1 |
2001-2018 | Bombus pomorum | MHNL | 1 |
2001-2018 | Colletes florealis | MHNL | 3 |
2001-2018 | Colletes fodiens | MHNL | 3 |
unknown | Bombus confusus | MHNL | 15 |
unknown | Bombus distinguendus | MHNL | 3 |
unknown | Bombus muscorum | MHNL | 6 |
unknown | Bombus pomorum | MHNL | 12 |
unknown | Colletes fodiens | MHNL | 1 |
Total | 78 |
From the recently checked 1301 Bombus specimens from MHNL, 713 did not bear any previous identification label at the species level. Amongst the 588 Bombus specimens bearing identification labels, 362 (62%) had an identification label which matched the recent species check; all the other specimens had their original identification corrected. This underlines the need for experts to check Museum collections in order to validate their data. The work of presenting the basic data allows the experts to know how many specimens there are in the surveyed Museums and also when and where the specimens come from.
We wish to thank the staff at the four Museums who made the recording of specimens in their care possible. Holger Dathe, Robert Fonfria, David Genoud, Michael Kuhlmann, Gérard Le Goff, Hugues Mouret, Alain Pauly, Stephan Risch and Erwin Scheuchl identified the specimens in MDV. Robert Mesibov gave valuable advice for formatting the data into GBIF format.
Study design: BG, data input: JYM, identification of Bombus specimens: GM, MI and FV, data analysis and formatting: GN, writing up: GN and BG, collection management: HL, VP, YD, JM. All authors commented and agreed on the final manuscript.