https://doi.org/10.3897/BDJ.13.e134282 (23 Jan 2025)
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Map showing the location of Mangrove Bay and El Qoseir in Egypt (A). Google Earth image depicting the two study locations (B). Layout of the Line Intercept Transects (C).


The transect line was stretched horizontally following the reef contour. Every biotic and abiotic component directly beneath the line was recorded. Photo credit: Victor Sebastian Scharnhorst.


The growth form and appearance of Acropora digitifera in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Antonia Auer, Theda Schöchtner, Gözde Özer.


The growth form and appearance of Acropora hemprichii in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


Amongst the Acropora colonies identified to genus level, eight morphotypes (A—H) were distinguished. Photo credits: (A) Lewis Alan Jones; (B), (C), (F) Joseph Wallace Daurella; (D) Theres Koch; (E), (H) Antonia Auer, Theda Schöchtner, Gözde Özer; (G) Victor Sebastian Scharnhorst.


The growth form and appearance of Astreopora myriophthalma in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of Montipora crypta in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of Montipora danae (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Montipora efflorescens (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Montipora cf. grisea in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Joseph Wallace Daurella.


The growth form and appearance of Montipora maeandrina in the reef are shown in (A), while (B) provides a close-up of another colony. Photo credits: Victor Sebastian Scharnhorst.


Amongst the Montipora colonies identified to genus level, four morphotypes (A—D) were distinguished. Photo credits: (A), (C) Joseph Wallace Daurella; (B), (D) Victor Sebastian Scharnhorst.


The growth form and appearance of Montipora tuberculosa in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Lewis Alan Jones.


The growth form and appearance of Gardineroseris planulata in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Leptoseris mycetoseroides in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Pavona diffluens in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: (A) Lewis Alan Jones; (B) Victor Sebastian Scharnhorst.


Amongst the Pavona colonies identified only to genus level, one morphotype (A—B) was distinguished. Photo credits: Theres Koch.


The growth form and appearance of Pavona varians in the reef are shown in (A), while (B) provides a close-up of another colony. Photo credits: Theres Koch.


The growth form and appearance of Stylocoeniella cf. guentheri in the reef are shown in (A), while (B) provides a closer-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of Coscinaraea monile in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Joseph Wallace Daurella.


The growth form and appearance of Turbinaria mesenterina in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Galaxea fascicularis (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Gyrosmilia interrupta in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Ctenactis cf. crassa in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Joseph Wallace Daurella.


The growth form and appearance of Leptastrea bottae (bleached) in the reef are shown in (A), with an arrow indicating the colony while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Leptastrea inaequalis (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Lewis Alan Jones.


The growth form and appearance of Leptastrea transversa in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of Acanthastrea hemprichii in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


Amongst the Echinophyllia colonies identified only to genus level, one morphotype (A—B) was distinguished. Photo credits: Lewis Alan Jones.


Amongst the Echinophyllia cf. colonies identified only to genus level, one morphotype (A—B) was distinguished. Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of the only Oxypora colony found is represented by one morphotype (A—B). Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of Cyphastrea chalcidicum in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Joseph Wallace Daurella.


The growth form and appearance of Cyphastrea kausti in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Cyphastrea magna in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Antonia Auer, Theda Schöchtner, Gözde Özer.


The growth form and appearance of Cyphastrea microphthalma in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Joseph Wallace Daurella.


Amongst the Cyphastrea colonies identified only to genus level, one morphotype (A—B) was distinguished. Photo credits: Joseph Wallace Daurella.


The growth form and appearance of Dipsastraea danai in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Joseph Wallace Daurella.


The growth form and appearance of Dipsastraea faviaformis in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Dipsastraea laxa (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Dipsastraea matthaii in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Antonia Auer, Theda Schöchtner, Gözde Özer.


The growth form and appearance of Dipsastraea pallida (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of Dipsastraea speciosa in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Echinopora forskaliana in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Echinopora fruticulosa (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Joseph Wallace Daurella.


The growth form and appearance of Favites abdita in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Antonia Auer, Theda Schöchtner, Gözde Özer.


The growth form and appearance of Favites cf. complanata in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of Favites rotundata in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of Favites vasta in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Lewis Alan Jones.


The growth form and appearance of Goniastrea edwardsi in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Antonia Auer, Theda Schöchtner, Gözde Özer.


The growth form and appearance of Goniastrea pectinata (bleached) in the reef are shown in (A), while (B) provides a close-up of another colony. Photo credits: (A) Theres Koch; (B) Victor Sebastian Scharnhorst.


The growth form and appearance of Goniastrea retiformis (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Lewis Alan Jones.


The growth form and appearance of Goniastrea stelligera in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Antonia Auer, Theda Schöchtner, Gözde Özer.


The growth form and appearance of Merulina scheeri in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of Paramontastraea peresi (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


The growth form and appearance of Pocillopora damicornis in the reef are shown in (A), while (B) provides a close-up of another colony. Photo credits: Theres Koch.


The growth form and appearance of a small Pocillopora sp. in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Lewis Alan Jones.


The growth form and appearance of Pocillopora verrucosa in the reef are shown in (A), while (B) provides a close-up of another (bleached) colony. Photo credits: (A) Victor Sebastian Scharnhorst; (B) Theres Koch.


The growth form and appearance of Seriatopora caliendrum (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: (A) Theres Koch; (B) Victor Sebastian Scharnhorst.


The growth form and appearance of Seriatopora hystrix in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Joseph Wallace Daurella.


The growth form and appearance of Stylophora cf. kuehlmanni (bleached) in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Joseph Wallace Daurella.


The growth form and appearance of Stylophora pistillata in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Antonia Auer, Theda Schöchtner, Gözde Özer.


Amongst the Stylophora colonies identified only to genus level, one morphotype (A—B) was distinguished. Photo credits: Theres Koch.


The growth form and appearance of Stylophora subseriata in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


The growth form and appearance of Porites rus in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Theres Koch.


Amongst the Porites colonies identified only to genus level, one morphotype (A—B) was distinguished. Photo credits: Joseph Wallace Daurella.


The growth form and appearance of Psammocora profundacella in the reef are shown in (A), while (B) provides a close-up of the colony. Photo credits: Victor Sebastian Scharnhorst.


The number of scleractinian coral species across the six different habitats at the study sites at Mangrove Bay.


Coral growth form distribution across six different habitats. The percentage of each growth form was calculated, based on its contribution to the total transect length for each habitat. Abbreviations: ACB (Acropora Coral Branching), ACD (Acropora Coral Digitate), CB (Coral Branching), CE (Coral Encrusting), CF (Coral Foliaceous), CM (Coral Massive), CMR (Coral Mushroom) and CS (Coral Submassive). Bars display the mean ± standard deviation. Error bars extending 0 were set to 0.


Distribution of various life form categories across the six habitats. Percentages were calculated, based on each category's contribution to the total transect length per habitat (excluding gaps). The "Algae" category comprises algae assemblages, coralline algae, macroalgae and turf algae. The "Dead Scleractinian Coral" category includes dead corals as well as dead corals overgrown with algae. The "Millepora spp." category encompasses Millepora dichotoma, Millepora exaesa and Millepora platyphylla. The "Benthic Fauna" category combines other species, such as molluscs, echinoderms and sponges. The "Scleractinian Corals" category includes all living hard corals. The "Soft Corals" category encompasses all octocorals that intersected the transect line, including those identified to the genus level, such as Heteroxenia and Rhytisma. The "Substrate" category comprises coral rubble, rock and sand. Bars display the mean ± standard deviation. Error bars extending 0 were set to 0.